result

Gene information

Detail information of Asa8G03546

Location

Gene	Chr	Start	End	Strand
Asa8G03546	chr8	949319103	949321320	-

Sequences

CDS

>Asa8G03546.1
ATGCTCAAATCTGATTTTGATAATTTCCCCAAAGGTCCTCGAGTTCAGTTCACTGTTCATGACTTTCTTGGCAATGGCATCTTCAACTCAGATGGACATCAATGGAAGGCACAAAGAAAGACTGCAAGTTTCGAGTTTAATACAAAATCACTGCGCATCTTTGTTGTGGAAAGTGTCCAACATGAAATTACTACCAGGCTTATACCTTTGCTGGGGAAGTACACCACAAATGAACAAGTGTTTGACATACAAGATGTTCTTGAGAGATTCGCATTTGACAATGTTTGCAAAGTTGCATTCAATGTAGACCCAGCTTGTTTAACAGATGATGATAACGCAGTGACATCTATTTTTGCTGATGCGTTCAGGGATGCAGCTGAATATAGTGCTGGAAGATTCTGGTATTTAGTTCCTAGATTTTGGAGAGTCAAAAGATTTTTGAATATTGGTTCAGAGAGGAGACTGAAAGAATCTATTGCTATAGTGCATGACTTTGCTACAAATATCATTCGATCGCGCATGAAAGAACTGAAGTTGACACCGACTAAACAAGCAGACGATCTTCTATCACGATATATAGCGATTGAAGATTATTCTGAGGAGTTTTTACGAGACATTGTAATAAGTTTTTTACTCGCAGGTCGTGAAACTACATCATCTGCGCTATCATGGTTTTTTTGGATCGTGTCATCGAGACCAGACGTGCAGAGTAGGATACTTGAAGAAATCCAAAAAATACGTGGACAAACAGGTGACGAAAATAGTGTGATGTTTGGACTAGACGAGCTGAGAGAGATGCATTATTTGCATGCAGCAATTACAGAGTCAATGAGATTATATCCTCCAGTTCCAACAAATATGTTGTTGTGCATGAAAAACACAGTGTTACCAGATGGGACCAAAATGAAGAAAGGGGAGTACATATCTTACAACTCGTATGCGATGGGAAGAATGGAAAAGGTCTGGGGAAAAGATTGTAAGGAATATAGACCGGATAGATGGTTAGATGAGGATGGAAAGTTTAGGCCTGAGAGCCCATTTAAGTTTCTAGCTTTTCATGCTGGACCGAGGTTGTGTTTAGGGAAAGAGATGGCGTATATACAAATGAAATCAATTGTTGTGTGTTTGTTTGATAAGTTTGTTGTAGAAATTGTGGGGAAGGAAGAAGTTCCTAAACAATCGCTGTCCTTGACACTGCGTATTAAAGGAGGGCTCCCTACAAGAGTTAAGTATCGATGTGGATAA

Protein

Gene

>Asa8G03546.1
ATGCTCAAATCTGATTTTGATAATTTCCCCAAAGGTCCTCGAGTTCAGTTCACTGTTCATGACTTTCTTGGCAATGGCATCTTCAACTCAGATGGACATCAATGGAAGGTTCTTGATTATGTCctaatttatatattgttttaattggCGTGAACAAAAGATGCAGCAAGTCTAGCCAGTAATAGTAACTAAAATTTGTTAGTCACTAATTGCACATTGGAACAAGACTTAAATTTATGTTGTTTTCAGATCTTATACTAACTGCTCTACATACTTCAATCCCCACTTAGGACTCTCTTTCTTCGAAGAAATACATTGTATCTTCCATGTCTATACTTGATGAATGAATTCTCTTTACATCTTGCTACCCATTtcctgaattttattttctattcactTCCTTCTAAAGAAAGTAAAAAATCATAATGAACTTGAACCATATCCTATATAAGGTTACCTTCCACCGTTCATTAGAAACCATGATAGGGTCCACTGCTGGATCCCTGAACTACTACACTCAACTCCGACATGCACATTAGAATTTTACCGCCCAGGCAACATGCAGGGCCTCTTCACCACAAACACTATATCGAACATGCACTAAAAGTAGTATTTCATGATTTCTCAAAAGGCCCTCTGTTTCGCTACATGGTCCTAGATTTCCTTGTTCATGGCATCTTTAATTCTGATGGCCATCGGTGGAAGGTGCACCTGTTGTTTTCTGTTACACTTATGTTTTTGTAGGCTGTTTCCTTATAAGAAAATCTTCAATAGAAATATTTGTATCAAAGTTTTGATACACCTTCATACATTGTGCACTACACGACAAATTACGCTTACAATAATTATATTCAGTAGATGTACTCATGTACATGATTTGTCATATCATGCACATGCAAAATAAGTGGAGATGTATCAAACCATTTATACAGATGAGATGTCTGTATCAAAGTTTTTCCCTGTACCTACTGCACAGTACTCTCTGAGGTAATTGTCTAATTTCtccaaagttaaaataaaatgaaatgaaatgaaaactactGAAAACACCAGTAGTACTAACATATAAATAACGATACAGGCACAAAGAAAGACTGCAAGTTTCGAGTTTAATACAAAATCACTGCGCATCTTTGTTGTGGAAAGTGTCCAACATGAAATTACTACCAGGCTTATACCTTTGCTGGGGAAGTACACCACAAATGAACAAGTGTTTGACATACAAGATGTTCTTGAGAGATTCGCATTTGACAATGTTTGCAAAGTTGCATTCAATGTAGACCCAGCTTGTTTAACAGATGATGATAACGCAGTGACATCTATTTTTGCTGATGCGTTCAGGGATGCAGCTGAATATAGTGCTGGAAGATTCTGGTATTTAGTTCCTAGATTTTGGAGAgtcaaaagatttttgaatattGGTTCAGAGAGGAGACTGAAAGAATCTATTGCTATAGTGCATGACTTTGCTACAAATATCATTCGATCGCGCATGAAAGAACTGAAGTTGACACCGACTAAACAAGCAGACGATCTTCTATCACGATATATAGCGATTGAAGATTATTCTGAGGAGTTTTTACGAGACATTGTAATAAGTTTTTTACTCGCAGGTCGTGAAACTACATCATCTGCGCTATCATGGTTTTTTTGGATCGTGTCATCGAGACCAGACGTGCAGAGTAGGATACTTGAAGAAATCCAAAAAATACGTGGACAAACAGGTGACGAAAATAGTGTGATGTTTGGACTAGACGAGCTGAGAGAGATGCATTATTTGCATGCAGCAATTACAGAGTCAATGAGATTATATCCTCCAGTTCCAACAAATATGTTGTTGTGCATGAAAAACACAGTGTTACCAGATGGGACCAAAATGAAGAAAGGGGAGTACATATCTTACAACTCGTATGCGATGGGAAGAATGGAAAAGGTCTGGGGAAAAGATTGTAAGGAATATAGACCGGATAGATGGTTAGATGAGGATGGAAAGTTTAGGCCTGAGAGCCCATTTAAGTTTCTAGCTTTTCATGCTGGACCGAGGTTGTGTTTAGGGAAAGAGATGGCGTATATACAAATGAAATCAATTGTTGTGTGTTTGTTTGATAAGTTTGTTGTAGAAATTGTGGGGAAGGAAGAAGTTCCTAAACAATCGCTGTCCTTGACACTGCGTATTAAAGGAGGGCTCCCTACAAGAGTTAAGTATCGATGTGGATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020276071.1	2.0e-155	cytochrome P450 94A1-like
Swissprot	O81117.2	1.1e-100	P450-dependent fatty acid omega-hydroxylase
trEMBL	A0A5P1EFQ7	1.4e-155	Cytochrome P450

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G56630.1	57.49	2e-137	485	CYP94D2	cytochrome P450, family 94, subfamily D, polypeptide 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa8G03546	AT3G56630.1	414	171	4	1	412	88	498	57.49	2e-137	485
Asa8G03546	AT1G34540.1	414	173	5	1	412	88	497	56.76	1e-131	466
Asa8G03546	AT2G27690.1	417	217	7	1	412	87	494	44.60	8e-101	363

Ortholog group

Species	Genes
Allium cepa	g283592.t1; g421689.t1; g507063.t1; g507064.t1
Allium fistulosum	AfisC1G00341; AfisC2G04003; AfisC2G04004; AfisC6G03429
Allium sativum	Asa0G05439.1; Asa6G05903.1; Asa7G00732.1; Asa8G03546.1
Arabidopsis thaliana	AT1G34540.1; AT3G56630.1
Oryza sativa	LOC_Os01g58950.1; LOC_Os01g58960.1; LOC_Os01g58970.1; LOC_Os01g58990.1; LOC_Os01g59000.1; LOC_Os01g59020.1; LOC_Os01g59050.1; LOC_Os03g12260.1; LOC_Os11g04290.1; LOC_Os11g04310.1; LOC_Os12g04100.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	14	399	227.6	2.4e-67

Gene Ontology

Accession	Ontology	Name
GO:0009055	F	electron carrier activity
GO:0005506	F	iron ion binding
GO:0055114	P	oxidation-reduction process
GO:0016705	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	F	heme binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00517	CYP81F; indol-3-yl-methylglucosinolate hydroxylase	EC:1.14.-.-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network