Detail information of Asa8G04072


Location
GeneChrStartEndStrand
Asa8G04072chr810960083461096013183+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020247073.16.6e-225LOW QUALITY PROTEIN: auxin response factor 7-like
SwissprotQ6YVY0.15.4e-216Auxin response factor 7
trEMBLA0A5P1FKB52.4e-224Auxin response factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G59750.460.370.0 760ARF1auxin response factor 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag406450.t1
Allium fistulosumAfisC6G02640
Allium sativumAsa8G04072.1
Arabidopsis thalianaAT1G59750.1; AT1G59750.2; AT1G59750.3; AT1G59750.4
Oryza sativaLOC_Os02g35140.1; LOC_Os04g36054.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family12222374.54.5e-21
PF06507.10Auxin_respFamily248330108.51.3e-31
PF02309.13AUX_IAAFamily52463551.21.4e-13

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity
GO:0009725Presponse to hormone

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14486K14486, ARF; auxin response factorEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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