Detail information of Asa8G04505


Location
GeneChrStartEndStrand
Asa8G04505chr811960192331196044262+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020267700.18.0e-60high mobility group B protein 15-like
SwissprotQ9MAT6.16.8e-40Nucleosome/chromatin assembly factor group D 15
trEMBLA0A5P1EQT25.8e-60ARID domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G04880.135.509e-43 170HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag200612.t1; g38497.t1
Allium fistulosumAfisC6G02178; AfisC6G02180
Allium sativumAsa8G04505.1
Arabidopsis thalianaAT1G55650.1; AT3G13350.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01388.18ARIDDomain3111349.74e-13

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0003677FDNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11765ARID2; AT-rich interactive domain-containing protein 2EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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