result

Gene information

Detail information of Asa8G04664

Location

Gene	Chr	Start	End	Strand
Asa8G04664	chr8	1241026765	1241031090	-

Sequences

CDS

Protein

Gene

>Asa8G04664.1
ATGGAGGGCGCAGGATCCAAGAGCAACGAAGAGGCGATTAGCGGTGGAGATTCTTCGAAGCAGGTGATGATGAGATGGGAGAGCATCTTGCCTCGCAAGTCGCTGAGAGTACTGCTTGTTGAGAGCGACGATGCGACGCGGCATATCGTCACCGCTTTGCTCAGGAAGTGCAACTACCGCGGTTAGTTTTTGCTGCCTTTGGCCTACTTTGATTCTTACATATTACATATCCAATTCTCGGTTATGTAGTAGTGTAATTTGAAGTGAACTATTTGTACCTTGTTGCTAAGACTTTAACAAGCTCGAAGTCGATATGATAACCTCTTTTTTGATTTTAGGATATAGTTATGATTTTAACTGTGCTAAAATTACTGAAAGATAGTTACTTGTGGTATTTTCGACATGATGTTGTTTAGTTTGATTGAAGCTCCATTTTTCCTTCTTAATTTGATTGTTTCTATCCTTACAGTTGCGGCTATTGCTGATGGAATGAAAGCATGGGAAGTGATgaaggaaaagaaatatatatttgatCTGGTTTTGACGGAAGTCGAGGTGCCTACTTTGTCAGGGACGGGACTTTTGACAAAGATTATGGAGACTGAAGAATGCAAGAATATACCTGTTGTCAGTGAGTTTTATGCAACTTTTTGGTCTTGAGGTATTCAGATTAGGGCCGACCTAGAAAGGGATTGGGATGCAATATGGGTACTTAGAGACAACTTTTTATGTCTTATTGTGATGCAAAACCAATAGAGAAAGAGTTTTTCATTTTCTACTATTTGCTAAAATAACTGAAGTTCAAACTCAGTAGGGAAATAACTGTTCGATATAAATAATTGATACTAGCTCAATTTTGTTGATATTACATTGTACACTGTATGGATGAACAAGACTGAGTTTGAATTACTTTACAATTTCCATTGAAGACAAACTTTTTGCATTGGATTTGATGTTTTATGTGGACTGAGAAAGTAAAAGTTATCATGCTATTGTAGGTTGTGCTCGTTATCAAAACAAAGATTTGTATTGTAAATCCGAAGGTTCAAAATTTAAATCGAACTGGGTATAAATCATATATCATACATGTAAATTGAACTGTTTTATTGTAAACCCTATCGAACTGGGCTATAATAGGAATGTAATCAGATCTTAAATAGAACATTcttatttgaaatgggatttaataagctataggattttaagatttttgacaacaaaaGTTTATGCATGTGTGCACGCTTGCCAGTTTATGTCCAACTAGTCATTGCAATTTTACACTTACATACTTTCTGCTCATCCTCGCAGTGATGTCCTCCCATGACTCTGTAAATGTTGTTCTTAACTGCATGCTTAAAGGTGCCGTAGATTTTCTTGTGAAGCCTGTTAGAAAAAATGAGCTACGAAACCTCTGGCAGCATGTTTGGAGGAGACATTGTATAGTATGTCGATCTAACTTAGAAGACTTTAAATGTTAAATGCACCACTGATTGTATTTTAAGACAATGCTAACTATGCTACTGATTAACACAGTCAAACAGCTCTTTAAACGCATCAGATAATACCACTGCGAGTAACCAAATTAGTGTGAACGTTGGCGATAGATCTAAGAGTGATGAAAACAATGATGAAAAATGTGATGCTCAGGTAACTAAAATTTGCCTTCCCACTACTTAGCGTTATTTGACACATAACAAATATTAATACCAGTGTAGAACAATCTTAGCTGCATAACTATTTGTGGTCAATGGTATTTTGTATTGAATATTAATTGATATTGGTTTGGGCAGAGTTCTGGTAATAAGCAGGATGAATATCACGAGAGCGTGCAAAATCCTGACCAGTCTTCTCAATCTGAAGGTATACATATGGATAAGGTACAAGTAAGCCGACCAACTGATAAATATCTCAGTTTAGAAAAGATAGCACCAAGTATAGCTAATGGTAAGTCGTCAGTTTAATAGCTTAAGTTATACATTCTCTTGTAAAGAATATATTACATTCAAATGATTGGTTGTCTTACAGATCATTCCGTGGCTAACAAAAGAGAACAAAGCCATTCATGCAATATTTCACATCATAGGGAAGCGGACATTGATCTTATGAGAGAAATGGGTGGAACACATGATCCTAGATTGTGTACTGAAAACCATTCTCCCAACCCTGATAGTTCTGGTACAAAGATGATTTTGTTTTTTGAGTCCAAGTCTGACAAACAACGtaccttttctatgttaaaaaatgATACTGCTGAGGGTACATATTTTGGAACTGCACACTCATCTTTTGCAGATGAAGAGTCGACTGCGGTTACTACACCAGTATTAGAACTTTCTTTAAATAGACCAGAGTCTGATGCCTGTGGGCAGATtgagattaaaaaaaagaatatcatTAAACCATCAGTTGGCTCAGCTTTTTCAAGGTAGGATTCtctaactctaatattctataaaatttattgcAAAATCCACCCATCATTTGCACTGTGAATAATTTTGTTTGCTCACTTTTCTTAGAAACTGTTTAGAAACTGGTATGATTCTTATAATAAGCCATACAATTTTTCATCTGCTCTTAGAACTCGTGAAGGTGTACCATgtgcaaattaattaattaatttttgttgaGTGAAATAAGAGAGGTAGTGCAAATGTACTTTTATTAATGGGCAGTGATGCTGGAAGTGTTGTGCTCTGAAGATTCTTAAAAAAAAgttgttctttctttttttgttttcctGAGAATGGACTTTATTTTGTCAAAAATCCAAACTGAAATAGGACTTCTACCTGTTCATGTTTTCTAAATTTTCGGACCTGCTTGATTTTGCTTTCACTGTTGTGCTTGCTTACATTCAGATTTGGTGGGGATTGAAAAGCCCAGATAACCGTAGTTCTAGTCTACAGGCTGGAAATACAAATGGAACAATTTCTGTTAGCTACTTAGCTATAGACAAAGCCTGCCACCTATGAATTTTAAGTTTCTTTTACGAGCcctatcaaattaattattttctgttGAGTGTAACTTCATTTACAGTTGCATTGAACTTAATTTTGTTTGGATTCATGAACTGCAAATACTTCAGCATTATATAGTTGTCGGGGATTATTCGATCTCTTAgggaaattttatatcaaaatggtaTGTAgtattttcttttgttgttctgGTACTCCTGAATCTGAAATCTGTCTTGTTTTTATAATCTATATGTCCACTGTCTTTGCATGGAAGAAGCTTGTATAAAATCTATTTATGCGGCTATATGTAGTTCAAGTTATATTACATATTCCTGTCTTTACAGTTAATCATGTACGCTATGCTAAAGTTTGTCATGCAAATTAAATTCCTGCAAAATgaattccatttcttatttctaaaGTTATCATGTGTCTTTACAATTGTAGTCATCTTCCACTTTATGACTTGTGCTTCGGCCATGGTATAACACGATGTGTTTTATACTTTCCCAGGTATGATGATAAAAGGGCTCAGCGTTCAACTGTACATGTTGAAATGTTAAATACTAACGAAAAGAAGACATCCATCACATGTACAGATAAAAGATCATCCGTGCAGGGAAATAAAATTGAAACTACACTTTATTTTCAACTCTCTTCTACGAACGATGAGAAATCCAGTTTACCTCCGCAGCCTAAAAGAAATGTTAATGCTAGTCCTATTCAGTGCCCTCAATTTGGTTTCCTTCCGATTCCTTTCGGATCATTACCTTACCATAACTTATGCCAAGAATACGGATCTTTAATGCAACCTATGCTTCTAAATGAACAGAGTCCTTCTACGCATGCAATTGATATATCCGGATCTAGAGATCCGAGTGAGCTATGTTATGTTAATGAAAAGACATATAATGACGGTAGCTGCAGCCATACATTTgttaaattaaatggaattgatgGTAGCAAAAGGACTGAAGATGAAACAAGAAATTTTGGAGTTTCTGTAGATAGTGCGAAAAAGACTACTCTACAAATGCTGGATCGATCACGACGCGAAGCTGCATTGCTTAAATTTCGATTAAAACGGAAGGATCGGTGCTTTGAAAAGAAGGTATATTAGAAGCATGTCTATTATTTCATTCAGGCTATCTTTTGGTACATCGTAGAAGCCATTTAACCAACTTACTCGCTATATGTTTCtgattcattaaaaatagtaatagtaaataaactaaatttacgtTTTTTACAGGTAAGATATCATAGTCGAAAACAACTCGCTGAGCAGCGGCCGAGAGTAAAAGGTCAGTTTATAAGTCAGAAAGTTACAAAAAGCTCAACGACAGAATCAAATTGCTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020246175.1	2.2e-121	two-component response regulator-like APRR3
Swissprot	Q689G6.1	7.1e-61	Pseudo-response regulator 95
trEMBL	A0A5P1E4P9	1.6e-121	Two-component response regulator-like PRR95

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G24470.1	47.62	1e-56	218	APRR5;PRR5	pseudo-response regulator 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa8G04664	AT5G24470.1	231	112	4	2	229	126	350	47.62	1e-56	218
Asa8G04664	AT5G24470.1	292	133	14	349	604	403	660	30.48	1e-16	85.1
Asa8G04664	AT2G46790.1	220	90	4	23	227	25	234	47.73	5e-53	206

Ortholog group

Species	Genes
Allium cepa	g237823.t1
Allium fistulosum	AfisC6G01946
Allium sativum	Asa8G04664.1
Arabidopsis thaliana
Oryza sativa	LOC_Os11g05930.1; LOC_Os11g05930.2; LOC_Os11g05930.3; LOC_Os11g05930.4; LOC_Os11g05930.5

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00072.21	Response_reg	Domain	37	148	73.4	1.4e-20
PF06203.11	CCT	Motif	562	604	62.6	2.3e-17

Gene Ontology

Accession	Ontology	Name
GO:0000156	F	phosphorelay response regulator activity
GO:0000160	P	phosphorelay signal transduction system
GO:0005515	F	protein binding
GO:0006355	P	regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K12130	PRR5; pseudo-response regulator 5	EC:-	Circadian rhythm - plant	ko04712

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network