Detail information of Asa8G04680


Location
GeneChrStartEndStrand
Asa8G04680chr812440744321244080189+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK57499.12.7e-149uncharacterized protein A4U43_C09F1130
SwissprotF4IXE7.16.5e-100Repressor of silencing 4
trEMBLA0A5P1E4U91.9e-149PHD-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G14980.147.232e-102 370IDM1;ROS4Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag120340.t1; g345437.t1
Allium fistulosumAfisC6G01911
Allium sativumAsa8G04680.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF16135.2JasFamily289041.69.2e-11
PF00628.26PHDDomain13617829.64.2e-07

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11643CHD4, MI2B; chromodomain-helicase-DNA-binding protein 4EC:3.6.4.12 --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.