Detail information of Asa8G04775


Location
GeneChrStartEndStrand
Asa8G04775chr812692442051269266861-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_026663468.12.0e-63MADS-box transcription factor 23-like isoform X2
SwissprotQ6Z6W2.25.6e-58OsMADS57
trEMBLA0A8B8J8N01.5e-63MADS-box transcription factor 23-like isoform X2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G37940.161.642e-66 249AGL21AGAMOUS-like 21

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag129598.t1; g140547.t1; g447817.t1
Allium fistulosumAfisC1G03138; AfisC6G01798; AfisC8G02359
Allium sativumAsa7G05476.1; Asa8G04775.1
Arabidopsis thalianaAT4G37940.1
Oryza sativaLOC_Os02g36924.1; LOC_Os02g49840.1; LOC_Os02g49840.2; LOC_Os02g49840.3; LOC_Os02g49840.4; LOC_Os04g38770.1; LOC_Os04g38780.1; LOC_Os08g33488.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain489585.61e-24
PF01486.14K-boxFamily12120989.41.2e-25

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09264K09264; MADS-box transcription factor, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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