result

Gene information

Detail information of Asa8G04796

Location

Gene	Chr	Start	End	Strand
Asa8G04796	chr8	1275742493	1275745540	+

Sequences

CDS

>Asa8G04796.1
ATGGACATGGATACTGGTTCCCATAACTGGCTCTCCTTCTCCCTCTCCAACCCTTCTTCCTACTTCCTTCAACATGGAGCGGACGACGGCATGGGGCCGAAGTTGGAAGACTTCTTAGGAGCGGGAGGCGGCGACCAGCCGGTGAAGTTCACCGGCGGTGAAGCGGACGCAAACAATAATAATGAGATCTACGTGGACAGCAATGATGAGTTGAGAAGTATCGCTGCTGCTGGCTTCTTGCATGCAGGTACTTCTCTGCCTGCTGACCAAGACGCCGACGTCAACAAGACGGTCGTGCCGGAGGCCAAAAAGGCCGTCGACACCTTTGGTCAGAGGACTTCTATCTACCGTGGAGTCACCAGGCATAGATGGACTGGAAGGTATGAAGCGCATCTTTGGGACAACAGTTGTAGGCGTGAAGGGCAGAGCCGCAAAGGAAGACAAGTTTATCTAGGTGGATATGATAAAGAAGACAAGGCAGCTAGGGCATATGATTTAGCTGCTCTGAAATACTGGGGTCCGACCACAACTACCAATTTTCCTGTATCCAATTACGAGAAAGAGTTGGAAGAGATGAAGAACATGACCCGTCAAGAGTTTGTTGCATCCCTTAGAAGAAAGAGCAGTGGATTCTCTAGAGGAGCTTCTATTTACAGAGGAGTTACCAGGCACCATCAACATGGTCGTTGGCAAGCAAGAATTGGTAGAGTAGCGGGCAATAAAGATCTTTATCTTGGAACATTCAGCACACAAGAAGAAGCTGCGGAAGCCTATGACATCGCAGCAATAAAATTCCGTGGTCTAAACGCAGTGACCAATTTCGACATGAGCCGCTACGACGTGAAAAGTATTGCAAGCAGTAGTCTTCCAATCGGGGGTATGGCAGGCCGGGCTTCAAAGCCTGATAACTCATGCTCCTCCTCCGATAACAACACCATGAACATCATGGATGCAAACCATCAAAACGACTATCAAGACTCATCATCGAATATCAGTTTCTCCATGCTCCCCATCAACAAACAGGACCAATATAATCAAGATTATTATTCTTTACTAGCTTATCAACAACAGCAGCAACAATATGGAATGTTGGCTTCAGGCGTGAATATGGATTTTGCTAACAATGAACTTGTCTGGAGCAATGGAGTTCTGCAGCATTCACAGTCGGTGTTGAACAGCAATGGCAGTATCCCTTATGCTACTCCGATAAATGCAGGATATGATCAGCAAGGTCAAAGTTATTATATGAGTAATTTGGTCAATAATGGATCAGGACCATCGGCTGCTTACTATACTGAAGCAGCAAAGTCTAGTAGTAATGTTGCAATGTTTCATAGTCCTTTGTTTGGAATGGAATGA

Protein

Gene

>Asa8G04796.1
ATGGACATGGATACTGGTTCCCATAACTGGCTCTCCTTCTCCCTCTCCAACCCTTCTTCCTACTTCCTTCAACATGGTaacatttctctaaacctaacatgTTTCCTTTTCTTACCAGAACGCCCTTTTGATAACTAGTTTCATAAGCAGGAGCGGACGACGGCATGGGGCCGAAGTTGGAAGACTTCTTAGGAGCGGGAGGCGGCGACCAGCCGGTGAAGTTCACCGGCGGTGAAGCGGACGCAAACAATAATAATGAGATCTACGTGGACAGCAATGATGAGTTGAGAAGTATCGCTGCTGCTGGCTTCTTGCATGCAGGTACTTCTCTGCCTGCTGACCAAGACGCCGACGTCAACAAGACGGTCGTGCCGGAGGCCAAAAAGGCCGTCGACACCTTTGGTCAGAGGACTTCTATCTACCGTGGAGTCACCAGGTATGTACACCATGAATAAGTTACACGTTGAACCTCCATCACATGCAAAACTGATAACGACAGCACCATAATTTCTATATTTAATGTAAAAACTagtaaaaatgatttcttttcttCATTAATCGATTGGAAATTTCAAATTTGGGTGCAGGCATAGATGGACTGGAAGGTATGAAGCGCATCTTTGGGACAACAGTTGTAGGCGTGAAGGGCAGAGCCGCAAAGGAAGACAAGGTATATTTTGCTACTAGAGACGTATCCGTATCTTTGCtacctaaatttaaaattatatcccATTTTTATACGGCTAACAAGAgcttttttgtttgttttcttgcTATGTTACGTGGCAATTATGGTTGATCATCTTGCAGTTTATCTAGGTATTATGTTGTCCTACACATAACAGCTTGTTTCTTTGTTTCTTTTATGGTTCAATTTTACAAAGTCTTGAATTTAATACAATAGGTGGATATGATAAAGAAGACAAGGCAGCTAGGGCATATGATTTAGCTGCTCTGAAATACTGGGGTCCGACCACAACTACCAATTTTCCTGTGCGTAGTAGTTACTTCTTCCAATTAGTTGAAGTTATGTGCTAAGTGAAAATTGCATTGAATAATACAAATTGAGCacatttattcttgtatttaggtaTCCAATTACGAGAAAGAGTTGGAAGAGATGAAGAACATGACCCGTCAAGAGTTTGTTGCATCCCTTAGAAGGTGTGTTCAGTTCATATCTTATTATTAGTTCTTGATTTTGTTTTCTACTTATGTTATGCGTTGTTTTAGCTGATCAATGTGTTTGTTTTGAACAGAAAGAGCAGTGGATTCTCTAGAGGAGCTTCTATTTACAGAGGAGTTACCAGGTATTTAATCACTGTTTTGATACAGATAAGAGAAAATTATGCTTTGATAATTAATTTGGCTTGTCTGTTTACAGGCACCATCAACATGGTCGTTGGCAAGCAAGAATTGGTAGAGTAGCGGGCAATAAAGATCTTTATCTTGGAACATTCAGtatgttttttctttttaacttttttttgttcaaatatcCATTTTTATCTACTTTAATAATAATGTCTTTCTTTTAAAAGTCAGTTGGGGTTCATATTCGTGTGCTTTTTGTTCAAACCTGTACAAATGGAATCCAAGAACAAAGAATAATACTTCATTCAAATTTTAAAGGCTGCATCATTCACATTTTCAGATAGAACAATTACTAGCTTACGTTACCATTTTATGAATGTTAGCGGTGTGATCAAATTAAATTTGCATTTTCAGTAACTGCAAAACTCAAGTTGATACGTTTTTGTGTAGCCGTTGTGTTGTATTATTTCTTTATCTCAAAACGTTTAATGAGATGCTAGTAAGCACATTATCAAGTTAATTAGAAGTGTGAGTATATACGTTTCctttacataattaaaacaatgaCTAAGCCAATGACCACTCTAACAATAGTAATAGTAGATTGTTGATCTGCTTGTAGCAAACTTTTCTTGTGTGACAAATATCCTTTTTCTTGCAACTTGGCAATAACATCTATCAATAATTGTCTGCCCACAAAATACGAAAATGATTGAGTTAATGGGTTTATTCAATGTTTTGACTATAGTATAATTAAGTTATGTTTAATTGTAGCGAATTCTTATCGTTCTAATAgctggaaattaaattatataccaaCTTGTTACCCCCAACATGACTATTAatactcagaaaaaaaaaaaaaaaaaaaccatataagGGATGTTTGAAAGAGtgtaatattaaaaatgatatttgctTGAGCAAAGTAGGTTCCCAGAGTAGAGAATACTGATCATCAAGGGATCTACCAGCCACTAAAAATGTGGAGTTCACACTGTATTGATCAGTGTAGTCATGCTTGATTTGGTGTCCCAATTTTCTCtcaaatttttttccaaaaaaaaaaaatagatgtttGCCTAGCGAGTGAAAATGTTAACATTATGCTTTTGCTTAGGCACACAAGAAGAAGCTGCGGAAGCCTATGACATCGCAGCAATAAAATTCCGTGGTCTAAACGCAGTGACCAATTTCGACATGAGCCGCTACGACGTGAAAAGTATTGCAAGCAGTAGTCTTCCAATCGGGGGTATGGCAGGCCGGGCTTCAAAGCCTGATAACTCATGCTCCTCCTCCGATAACAACACCATGAACATCATGGATGCAAACCATCAAAACGACTATCAAGACTCATCATCGAATATCAGTTTCTCCATGCTCCCCATCAACAAACAGGACCAATATAATCAAGATTATTATTCTTTACTAGCTTATCAACAACAGCAGCAACAATATGGAATGTTGGCTTCAGGCGTGAATATGGATTTTGCTAACAATGAACTTGTCTGGAGCAATGGAGTTCTGCAGCATTCACAGTCGGTGTTGAACAGCAATGGCAGTATCCCTTATGCTACTCCGATAAATGCAGGATATGATCAGCAAGGTCAAAGTTATTATATGAGTAATTTGGTCAATAATGGATCAGGACCATCGGCTGCTTACTATACTGAAGCAGCAAAGTCTAGTAGTAATGTTGCAATGTTTCATAGTCCTTTGTTTGGAATGGAATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008803593.1	3.9e-136	AP2-like ethylene-responsive transcription factor AIL5
Swissprot	Q6PQQ3.2	2.6e-105	Protein AINTEGUMENTA-LIKE 5
trEMBL	A0A8K0MUB0	4.9e-141	AP2-like ethylene-responsive transcription factor AIL5

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G57390.1	51.48	3e-114	409	AIL5;CHO1;EMK;PLT5	AINTEGUMENTA-like 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa8G04796	AT5G57390.1	472	165	11	32	452	100	558	51.48	3e-114	409
Asa8G04796	AT3G20840.1	216	34	2	94	308	162	375	82.87	1e-106	383
Asa8G04796	AT1G51190.1	244	50	3	75	308	141	384	75.41	7e-106	381

Ortholog group

Species	Genes
Allium cepa	g199946.t1
Allium fistulosum	AfisC6G01750
Allium sativum	Asa8G04796.1
Arabidopsis thaliana	AT1G72570.1
Oryza sativa	LOC_Os04g55970.1; LOC_Os04g55970.2; LOC_Os11g19060.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	114	173	45.2	7.5e-12
PF00847.17	AP2	Domain	216	267	39.2	5.6e-10

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09285	OVM, ANT; AP2-like factor, ANT lineage	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network