result

Gene information

Detail information of Asa8G04959

Location

Gene	Chr	Start	End	Strand
Asa8G04959	chr8	1318096645	1318099014	+

Sequences

CDS

>Asa8G04959.1
ATGTCGACAACTAGCTCCTACACGGCTGTCAAGGCCGATACCCCAAACATCAGCAGCCAGGTTCGATCAATGCAGCCATTAAGAGACCGACTTGCCATCATATCGGGTGCGTCGGGCGGGATAGGATCCGAAATATGTACCCACCTTCACTCCATGGGAGCAAACTTAGTTATCAGCTACTTGGGGGAGTCTTCATTAGTCGACCGGCTACTTCACACGTTCAACTCAACCGATGGGCCACTGCGTGCCATATCTGTAGAAGCAGACGTTGCCATCCCAACCGATGTCAAACTCCTCTTCGACCGGGCCGAGCAAGCTTTTGGTCCAGTCCATATATTAGTGGCAGCCCACGGGATCCAGGACACGGAATACCCAATGGTATCAGAGACGTCGGTCGAAACTTGGGAGAAAACATTCAACGTGAATGCGAAAGGAACGTTCTTGCTATGCAGGGAGGCCGCGAATCGGCTGGTGAGAGGCGGGGGTGGTCGGATCGTGACTATGTCGTCCTCCACCGTTGGAGCAATAAGGCCGGGCTACGCTATCTATTCAGCCAGCAAAGCTGCGATTGAAGTAATGACAAAGGTGTTGGCAAAAGAGTTGAAGGGGAGTGGAATAAGTGTGAACGCTGTAGCGCCTGGTCCGGTGAAGACGGAGCTGTTTTATAGAGGGAAGACAGAAGAGCTGGTTAGGGCTTTGGAAGCGGACAATCCGATGGGCCGGCTGGGTGAGCCCAAGGATGTGGCTGCGACGGTGGGTTTTTTGGTTAGTGATGAGGCGGAGTGGATTAATGGGCAGATCGCTGAAAATGGCTTTGAAGATCCAGAAGATACTAAAGATTTGACGGAGAAAGAAAGAAAATCGATCACAATATTGAGTTGGAATGATCTGCAAGCTCGTATTGTGATGACTGCAAATATCGATGATGAAGCATACGATCATATTATTGGAGAAAATTGCGCAAAAGATGTGTGGAATTTATTGAAGGAGATTTATGGTAAGAATGTGGAGAACACACAAGAAGATAAATTGACAGAGTCTATTTCTGAAGTCAGAGCTGAAAGTAGCGTAACTGATCCCGCAAACGTGCCAAATGGCAACGAAGCCAAAGTTCACATTGAAGAGGTTAAGTCAACCGATGATGTGAAAGCTAATAGCAAAAATGGCGGTGGGGATGCAAAAAAAGAAACTCCCGCAAAGAGTGGGAAGAAGAGTCCTACATCTGGTGGCTCTGTTTTTTGCAAATCATGTTCCAAGACATTCAACCCAGAAAAGGCTTTAGAGTCTCATACAAAGTCCAAACATTTTGCTCAAGACACAAAAATCGCAAATAGTTTCCCGGCTTATACTCAAGGCAATTCTGGAAATTTGGTAAAAGTATCCTTAAAGAGGAGAGAGCAAAACACAAATGAAAATTCCAAAGAAACGTCAAGAACCGGAGATAAAATTATTAGTGCGAAGTTAGATTGGGCAAATAATCAAGTAGAAGCACAAAATGGCATTGCGAAAAAGCAAGCGGTAGCTGATTTTGTGAGTGATGTGTGTAAGAATGAGAAAGCAGCAAAAGTGAATCAAGAAAAGATGATAAAAGTTATAACAGAGAACACAAATGAGAAGTGGGAAAAAGCCAGCACGAAGACGAAGAGAGAAGGAAAACTGAAAACACCCCCTCATTATTTTACCACTGCTCTTAAAGTGTTGAAGAGCCTTAACGTAACCTACAAAAGAAGAAGACAATTAAGAAAGTTTGGATAA

Protein

Gene

>Asa8G04959.1
ATGTCGACAACTAGCTCCTACACGGCTGTCAAGGCCGATACCCCAAACATCAGCAGCCAGGTTCGATCAATGCAGCCATTAAGAGACCGACTTGCCATCATATCGGGTGCGTCGGGCGGGATAGGATCCGAAATATGTACCCACCTTCACTCCATGGGAGCAAACTTAGTTATCAGCTACTTGGGGGAGTCTTCATTAGTCGACCGGCTACTTCACACGTTCAACTCAACCGATGGGCCACTGCGTGCCATATCTGTAGAAGCAGACGTTGCCATCCCAACCGATGTCAAACTCCTCTTCGACCGGGCCGAGCAAGCTTTTGGTCCAGTCCATATATTAGTGGCAGCCCACGGGATCCAGGACACGGAATACCCAATGGTATCAGAGACGTCGGTCGAAACTTGGGAGAAAACATTCAACGTGAATGCGAAAGGAACGTTCTTGCTATGCAGGGAGGCCGCGAATCGGCTGGTGAGAGGCGGGGGTGGTCGGATCGTGACTATGTCGTCCTCCACCGTTGGAGCAATAAGGCCGGGCTACGCTATCTATTCAGCCAGCAAAGCTGCGATTGAAGTAATGACAAAGGTGTTGGCAAAAGAGTTGAAGGGGAGTGGAATAAGTGTGAACGCTGTAGCGCCTGGTCCGGTGAAGACGGAGCTGTTTTATAGAGGGAAGACAGAAGAGCTGGTTAGGGCTTTGGAAGCGGACAATCCGATGGGCCGGCTGGGTGAGCCCAAGGATGTGGCTGCGACGGTGGGTTTTTTGGTTAGTGATGAGGCGGAGTGGATTAATGGGCAGGTAATTAGGGTAAACGGTGGTTACGTATGAGTGTTTGTTTGTGCACAGGTTCACTCctgttggcgtaaaccaaaattaattaattatagtagtgtctattaaaataaaaagacatgtaCATTCGTCAAAAGACATGTCTATgtcaaaagtcatgtccattcatcaagagtcatatccgttcatcaagtgtcatgtccgttcagtgaagtgtcatgtttgttcggtgaaaagtcatgtttatttaatgttgtgtctattgaaatggtttgtaaaccactatatatatgtggtcattttagtGAATGAAGTAAGGGaaaaagcaagaaataaaataGTTCTTCCGCCTACAAATTATTGTCTACTTCCTCCAACAAACTAGTATCATAtcttctctactccatcaaactagtatcaaagccttcttcaaaaaaccaacaaactggtatcaaagccaaaaaaaaaaaaaaaaaaaaaaaaaaactctaacaactggtatcagagcctggttgaaaaatgacatttcaatttctttttccgtttgttctcacaaaagaaaactttgaagcgtggagtaacaaaaagaaagaagaattgatctctaaaggaTTATGAGAGATCGCTGAAAATGGCTTTGAAGATccagaagatactaaagatttgacggagaaagaaagaaaatcgatcacaatattgagttggaatgatctgcaagctcgtattgtgatgactgcaaatatcgatgatgaagcatacgatcatattattggagaaaattgcGCAAAAGATGTGTGGAATTTattgaaggagatttatggtaagaatGTGGAGAACACACAAGAAGATAAATTGACAGAGTCTATTTCTGAAGTCAGAGCTGAAAGTAGCGTAACTGATCCCGCAAACGTGCCAAATGGCAACGAAGCCAAAGTTCACATTGAAGAGGTTAAGTCAACCGATGATGTGAAAGCTAATAGCAAAAATGGCGGTGGGGATGCAAAAAAAGAAACTCCCGCAAAGAGTGGGAAGAAGAGTCCTACATCTGGTGGCTCTGTTTTTTGCAAATCATGTTCCAAGACATTCAACCCAGAAAAGGCTTTAGAGTCTCATACAAAGTCCAAACATTTTGCTCAAGACACAAAAATCGCAAATAGTTTCCCGGCTTATACTCAAGGCAATTCTGGAAATTTGGTAAAAGTATCCTTAAAGAGGAGAGagcaaaacacaaatgaaaattcCAAAGAAACGTCAAGAACCGGAGATAAAATTATTAGTGCGAAGTTAGATTGGGCAAATAATCAAGTAGAAGCACAAAATGGCATTGCGAAAAAGCAAGCGGTAGCTGATTTTGTGAGTGATGTGTGTAAGAATGAGAAAGCAGCAAAAGTGAATCAAGAAAAGATGATAAAAGTTATAACAGAGAACACAAATGAGAAGTGGGAAAAAGCCAGCACGAAGACGAAGAGAGAAGGAAAACTGAAAACACCCCCTCATTATTTTACCACTGCTCTTAAAGTGTTGAAGAGCCTTAACGTAACCTacaaaagaagaagacaattaagaaagtttggataa

Functional annotation

Database	accession number	e-value	annotation
nr	PKA56973.1	9.9e-84	Short-chain type dehydrogenase/reductase
Swissprot	Q9SQR4.1	9.1e-66	NADPH-dependent aldehyde reductase-like protein, chloroplastic
trEMBL	A0A2I0AN44	7.2e-84	Short-chain type dehydrogenase/reductase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G13180.1	52.80	4e-74	276		NAD(P)-binding Rossmann-fold superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa8G04959	AT4G13180.1	250	115	2	26	272	12	261	52.80	4e-74	276
Asa8G04959	AT3G03980.1	251	112	3	26	267	13	262	51.39	2e-69	260
Asa8G04959	AT5G18210.1	240	118	2	23	258	4	243	49.17	4e-62	236

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13561.3	adh_short_C2	Domain	36	267	187.9	1.8e-55

Gene Ontology

Accession	Ontology	Name
GO:0008152	P	metabolic process
GO:0046872	F	metal ion binding
GO:0016491	F	oxidoreductase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00059	fabG, OAR1; 3-oxoacyl-[acyl-carrier protein] reductase	EC:1.1.1.100	Fatty acid biosynthesis	ko00061
			Biotin metabolism	ko00780
			Prodigiosin biosynthesis	ko00333

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network