result

Gene information

Detail information of Asa8G04968

Location

Gene	Chr	Start	End	Strand
Asa8G04968	chr8	1319946197	1319949225	+

Sequences

CDS

>Asa8G04968.1
ATGTCTAAATTGTACGTTATTCTACTAATATTTATTCCATTCTGCACTTGTGCGACCGAGGATGGCCTTCGGAACGACAGAGATGCCCTTCTAACATTTCTATCTGGAATCATTGAAGACCCAAGCAATGCACTTGCAAACTGGAACTCTACCAGCATCGACACATGCAGTTGGAATGGAGTCGTCTGCGATAACAGTTCAAGAGTTGTGCAGTTGCTCTTGAATGATACAGGCTTAAGTGGAGTGATATCTCCAGCACTAGCAAATCTTTCTCTTTTGACGGTTCTTGATCTCTCTGGAAATGTTTTCAGTGGAGAGATTCCTTATGAGCTTGGTGCACTTTCTCAGTTAACTGAATTAAGTCTTGCTTCAAATAATCTAGATAGTTCGATTCCTTCGAGTTTAGGATTGCTTAAGAAACTAGATTACCTTGACTTGAACCAAAATCGACTTACCGGTTCAATTCCAGATTCTTTCTTTTGTAATTGCACTTCTTTGAGATACATTGATCTTTCTAACAATTCATTGTCCGGAAAAACCCCAATGACAGACCAATGCACCATCAAGAACTTAAGGTTTCTCAATCTTTGGTCAAATTATCTCGAGGGTCCGATTCCTTATTCTATGTCAAATTTTTCTGCACTCGAGTGGATTGATTTCGAGTCGAATTATTTAACAGGAGGAGTACCAGCTAATATTTTTGACAAAATGACTTATTTAAAATACCTTCATTTATCCTACAACAATCTATCAACTAGCACCACAAAGTTTGATGCATTTTTTAAATCTTTGAAGAATTGCACGCACTTGAAAGAGTTAGAGCTTGCAGGTAACAATTTCAGAAGTCAGATACCATTATCCGTTTCTTCTCTTCCTATCAGTCTTCATCAGCTTCACCTTGAAGACAATCTTCTTTTTGGCCCAATTCCTGCAAATATATCAAACCTTTTAAACCTTACATATTTGAATTTATCGAATAATTATTTGAATGGATCGATACCACCTGATATATCGAAATTGAGGAGATTGGAGCGATTCTATCTTTCAGATAACCTGTTGTCAGGTGTGATTCCAGTGTCAATTGGTGATATGTCCCAGTTAGGACTAGTTGATTTATCAAGAAACTTTCTCTCCGGCTCAATTCCTGGTAACATATCAAATCTAAAGCAGTTGAGAAGGCTAATGCTTCACAATAACAAGTTCTCGGGAACAATTCCAACAAGTCTTGGTGAATGTTCTAATTTAGAAATTTTGGATCTTTCATATAACCAATTAACGGGTAATCTTAGCAGCATCACAAGGTTAACAGGCTTAAAGTTCTATCTAAATGCATCAAATAATTACTTGAGTGGTACGCTTCCAATAGAGCTGAGCAAAATTGATATGATAACAGCTTTGGATTTGTCATCAAACAAGATTTCTGGATCGATTCCATCGCAAATCGAAAGCTGCATCGAGCTTGAATATCTGAACCTCTCATCAAATTTTCTACAAGGTAGACTGCCGGACTCTATTGGAGCATTGCCTAATCTAAACACTCTTGATATTTCTTCAAATAGGTTATCTGGAGCCATTCCCAAAACTATACAAGAATCATCAACTCTCAGGCAACTAAATGTCTCATTCAATAATTTCTCAGGAGTTATACAGCATCGAGGAGCCTTTGCTTCTCTATCTGACCGTTCATTTCTTGGTAATCCTCTCCTTTGTGGATCAGCCACAGGAAAACTATCATGCACAAACAAAAGAGCACACCTTCATCCTTTACTACCAATACTCCTTTCTTTAATAGGCTCATCGTCGACAATTATGGCCTGTTTTTTTGTTTACCCTGTGGTCATGAAATCAAGGAAAAAAACCAAAGCACTGTCATTTCAATGCTCTATGAAAGACAATGAAGAACAAAGCAAGAAAGATCATCCAAGAATTTCCTACCGTGAGCTTCTAGAAGCAACTGGAGGGTTCTCAGAAACAAACCTAATTGGTGCAGGTAGGTTCGGGAAAGTGTACAAAGGCATTACTTCAGATGGAACAAGAATAGCCGTAAAGGTACTGAATCTTAAAACTGATGAAAAGGAAATATCTGACAGCTTCAAAAGAGAGTGTGACATATTAAAAAGGACCCGACATAGAAATTTGATCAAGATAATAACGACATGTAGTAAACCTGACTTTAAAGCACTAGTACTTCCACTCATGCAAAATGGAAACCTTGATGGTCATTTGTATCCAAATGATGGGTCGAGTTGTAAGCTAAGTTTGGTTCAGTTACTAAGTATAGCAAGCGACGTAGCCGAAGGGATTGCATACTTGCACCACTACTCGCCTGTTAAAGTAGTACACTGCGATCTAAAGCCAAGCAATGTACTTCTGGATGAAAACATGACGGCTATTGTTTCGGACTTTGGAATATCTAAATTGGTTAAGGGTGAGAAGTATGATGACTGTTTTACCGGTGATGATGATCCAGCTTCATGTATATCAACCACTGGCTTGTTACATGGATCAGTTGGTTATATTGCACCTGAATATGGATTGGGTGGACAACCTTCAGTGCAAGGAGATGTGTATAGTTTTGGAGTTCTACTCTTAGAGATAATTACTGGAAGAAGACCAACTGATGTTGTATTCCACGACGGACTCACGTTACAAGAGTGGGTAAAGAACAACTACAAATACAATACTGATCCATTAACCTCAAATGCGTATTCTATAGAATCTTGTCTTTTAAATGATGAAACTTTATACGTCACGGAACTAAAGAGGGATATGATTCTTGAAACCATTGAACTTGGGCTTGCATGCACACACTTTGCGCCAGCACTGAGGCCCACTATGGAAGATGTTGCACATGAGATTGCATTATTGAAAGCAAATCTTTCGAGTGGTGATATAAACCAATCTTTACTGGCTGGGTTATTAAATAACTAA

Protein

Gene

>Asa8G04968.1
ATGTCTAAATTGTACGTTATTCTACTAATATTTATTCCATTCTGCACTTGTGCGACCGAGGATGGCCTTCGGAACGACAGAGATGCCCTTCTAACATTTCTATCTGGAATCATTGAAGACCCAAGCAATGCACTTGCAAACTGGAACTCTACCAGCATCGACACATGCAGTTGGAATGGAGTCGTCTGCGATAACAGTTCAAGAGTTGTGCAGTTGCTCTTGAATGATACAGGCTTAAGTGGAGTGATATCTCCAGCACTagcaaatctttctcttttgacgGTTCTTGATCTCTCTGGAAATGTTTTCAGTGGAGAGATTCCTTATGAGCTTGGTGCACTTTCTCAGTTAACTGAATTAAGTCTTGCTTCAAATAATCTAGATAGTTCGATTCCTTCGAGTTTAGGATTGCTTAAGAAACTAGATTACCTTGACTTGAACCAAAATCGACTTACCGGTTCAATTCCAGATTCTTTCTTTTGTAATTGCACTTCTTTGAGATACATTGATCTTTCTAACAATTCATTGTCCGGAAAAACCCCAATGACAGACCAATGCACCATCAAGAACTTAAGGTTTCTCAATCTTTGGTCAAATTATCTCGAGGGTCCGATTCCTTATTCTATGTCAAATTTTTCTGCACTCGAGTGGATTGATTTCGAGTCGAATTATTTAACAGGAGGAGTACCAGctaatatttttgacaaaatgacTTATTTAAAATACCTTCATTTATCCTACAACAATCTATCAACTAGCACCACAAAGTTTGATGCATTTTTTAAATCTTTGAAGAATTGCACGCACTTGAAAGAGTTAGAGCTTGCAGGTAACAATTTCAGAAGTCAGATACCATTATCCGTTTCTTCTCTTCCTATCAGTCTTCATCAGCTTCACCTTGAAGACAATCTTCTTTTTGGCCCAATTCCTGCAAATATATCAAACCTTTTAAACCTTACATATTTGAATTTATCGAATAATTATTTGAATGGATCGATACCACCTGATATATCGAAATTGAGGAGATTGGAGCGATTCTATCTTTCAGATAACCTGTTGTCAGGTGTGATTCCAGTGTCAATTGGTGATATGTCCCAGTTAGGACTAGTTGATTTATCAAGAAACTTTCTCTCCGGCTCAATTCCTGGTAACATATCAAATCTAAAGCAGTTGAGAAGGCTAATGCTTCACAATAACAAGTTCTCGGGAACAATTCCAACAAGTCTTGGTGAATGTTCTAATTTAGAAATTTTGGATCTTTCATATAACCAATTAACGGGTAATCTTAGCAGCATCACAAGGTTAACAGGCTTAAAGTTCTATCTAAATGCATCAAATAATTACTTGAGTGGTACGCTTCCAATAGAGCTGAGCAAAATTGATATGATAACAGCTTTGGATTTGTCATCAAACAAGATTTCTGGATCGATTCCATCGCAAATCGAAAGCTGCATCGAGCTTGAATATCTGAACCTCTCATCAAATTTTCTACAAGGTAGACTGCCGGACTCTATTGGAGCATTGCCTAATCTAAACACTCTTGATATTTCTTCAAATAGGTTATCTGGAGCCATTCCCAAAACTATACAAGAATCATCAACTCTCAGGCAACTAAATGTCTCATTCAATAATTTCTCAGGAGTTATACAGCATCGAGGAGCCTTTGCTTCTCTATCTGACCGTTCATTTCTTGGTAATCCTCTCCTTTGTGGATCAGCCACAGGAAAACTATCATGCACAAACAAAAGAGCACACCTTCATCCTTTACTACCAATACTCCTTTCTTTAATAGGCTCATCGTCGACAATTATGGCCTGTTTTTTTGTTTACCCTGTggtcatgaaatcaaggaaaaaAACCAAAGCACTGTCATTTCAATGCTCTAtgaaagacaatgaagaacaaaGCAAGAAAGATCATCCAAGAATTTCCTACCGTGAGCTTCTAGAAGCAACTGGAGGGTTCTCAGAAACAAACCTAATTGGTGCAGGTAGGTTCGGGAAAGTGTACAAAGGCATTACTTCAGATGGAACAAGAATAGCCGTAAAGGTACTGAATCTTAAAACTGATGAAAAGGAAATATCTGACAGCTTCAAAAGAGAGTGTGACATATTAAAAAGGACCCGACATAGAAATTTGATCAAGATAATAACGACATGTAGTAAACCTGACTTTAAAGCACTAGTACTTCCACTCATGCAAAATGGAAACCTTGATGGTCATTTGTATCCAAATGATGGGTCGAGTTGTAAGCTAAGTTTGGTTCAGTTACTAAGTATAGCAAGCGACGTAGCCGAAGGGATTGCATACTTGCACCACTACTCGCCTGTTAAAGTAGTACACTGCGATCTAAAGCCAAGCAATGTACTTCTGGATGAAAACATGACGGCTATTGTTTCGGACTTTGGAATATCTAAATTGGTTAAGGGTGAGaagtatgatgactgttttaccgGTGATGATGATCCAGCTTCATGTATATCAACCACTGGCTTGTTACATGGATCAGTTGGTTATATTGCACCTGGTAAGttgatttttaaaacctttttctttcttctttgtttCTCATTATTGTTATCTAGTTTCTCAGTTACCAAACTGTCTACGTCAAACAAATTACAGAATATGGATTGGGTGGACAACCTTCAGTGCAAGGAGATGTGTATAGTTTTGGAGTTCTACTCTTAGAGATAATTACTGGAAGAAGACCAACTGATGTTGTATTCCACGACGGACTCACGTTACAAGAGTGGGTAAAGAACAACTACAAATACAATACTGATCCATTAACCTCAAATGCGTATTCTATAGAATCTTGTCTTTTAAATGATGAAACTTTATACGTCACGGAACTAAAGAGGGATATGATTCTTGAAACCATTGAACTTGGGCTTGCATGCACACACTTTGCGCCAGCACTGAGGCCCACTATGGAAGATGTTGCACATGAGATTGCATTATTGAAAGCAAATCTTTCGAGTGGTGATATAAACCAATCTTTACTGGCTGggttattaaataactaa

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020261819.1	1.1e-148	putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130
Swissprot	Q9ZUI0.1	2.5e-116	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130
trEMBL	A0A8K0MU70	1.9e-129	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G24130.1	54.62	0.0	896		Leucine-rich receptor-like protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa8G04968	AT2G24130.1	919	397	11	53	960	51	960	54.62	0.0	896
Asa8G04968	AT3G47090.1	1022	519	23	24	953	23	993	35.23	4e-136	483
Asa8G04968	AT3G47570.1	957	484	20	26	888	25	936	34.90	8e-136	481

Ortholog group

Species	Genes
Allium cepa	g137185.t1; g322352.t1
Allium fistulosum	AfisC6G01456; AfisC7G00921
Allium sativum	Asa3G04180.1; Asa8G04967.1; Asa8G04968.1
Arabidopsis thaliana	AT2G24130.1
Oryza sativa	LOC_Os06g08690.1; LOC_Os06g08710.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	25	64	48.0	1e-12
PF13855.3	LRR_8	Repeat	140	178	27.1	2.4e-06
PF13855.3	LRR_8	Repeat	190	250	29.4	4.5e-07
PF13516.3	LRR_6	Repeat	266	281	11.0	0.32
PF00560.30	LRR_1	Repeat	318	340	12.9	0.11
PF13516.3	LRR_6	Repeat	412	427	11.8	0.19
PF13855.3	LRR_8	Repeat	486	545	31.9	7.4e-08
PF00069.22	Pkinase	Domain	656	950	137.9	3.5e-40

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13420	FLS2; LRR receptor-like serine/threonine-protein kinase FLS2	EC:2.7.11.1	MAPK signaling pathway - plant	ko04016
K13420		EC:2.7.11.1	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network