Detail information of Asa8G05150


Location
GeneChrStartEndStrand
Asa8G05150chr813655574761365585381+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020250210.13.7e-183zinc finger CCCH domain-containing protein 19-like
SwissprotQ9SIV5.31.9e-139Protein Needed for RDR2-independent DNA methylation
trEMBLA0A1R3L6M35.5e-173Plus3 domain-containing protein (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G16485.152.042e-163 573NERDnucleic acid binding;zinc ion binding;DNA binding

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag300732.t1
Allium fistulosumAfisC6G01270
Allium sativumAsa7G03851.1; Asa8G05150.1
Arabidopsis thalianaAT3G51120.1
Oryza sativaLOC_Os09g36090.1; LOC_Os10g36810.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02201.15SWIBDomain31338658.63.8e-16
PF03126.15Plus-3Domain45455783.21.6e-23
PF02213.13GYFDomain79583943.31.9e-11

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003677FDNA binding
GO:0005634Cnucleus
GO:0016570Phistone modification
GO:0006352PDNA-templated transcription, initiation
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K01062PLA2G7, PAFAH; platelet-activating factor acetylhydrolaseEC:3.1.1.47 Ether lipid metabolismko00565

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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