result

Gene information

Detail information of Asa8G05216

Location

Gene	Chr	Start	End	Strand
Asa8G05216	chr8	1385096700	1385099681	+

Sequences

CDS

Protein

Gene

>Asa8G05216.1
ATGGGGAATTGCTGGGGTGTGAGGATCAAGTCTGTGAACACTAGCAGTAGCCTTCCAACTTCAGGTTTTTTAATACTCTTGCTCTTTACTACGTCTTATACTCTTTGATTTTGAGAGATTGGTGTTTATTTCGGTAAATCGATCGTTGTGCTCATAAATTGAGAAATTCATaggtatattattatttttgatggaTTTCTGATTGTGAACATGAATTTTATCATGACACAACGGATTACGAATCATTTATTGACTGTGGGGACTTAGTTGTCAAGGTGTAGTCTACATAATTGGATGATTCATGATAGGACAAAAGAAGAGCTAAATTGGGAAGAAAGGATCTGAAAATATACTCGATCCAAGGAAATACGATTCAATGATTGAAAATTATGTAAAATGAGTCATGAATAAACTTTTCGGTGTCTTGATTCTCGACGCTTGATTCAGTTAGTTCATGTTAGATGTATACTCACAAATATTTTCATTCTGTAACATTTTAGCTGCAACTTCTAGGAGTAGTGGAAAAAGATTTAGTGGGTCAAGCAGTAGGCTTTCATCATCCTCACTTCCACCAACCTCTAGAAGCGAAGGGGAAATCTTACAATCATCGAATTTGAAAAGTTTTACATTTAGCGAACTCAGGAGCGCCACTAGAAACTTCCGTCCTGACAGTGTTTTAGGGGAAGGCGGCTTTGGTTCTGTATTCAAAGGATGGCTTGATGAACAAACTCTTGTAGCGTCAAAGCCTGGAACTGGAATTGTTATTGCTGTAAAAAGGCTCAACAAAGAAGGGCTGCAAGGTCATAGAGAATGGTTGGTATGTATCTTCTTACCTCAAAGAGTAGAATGTTACCTCAAAGAACAGAATGCGTTGTTTCTAAATCTTTAGGCTTGCAAACCTAGAAGATGTTAAGTTACCTGGTTGTTTAGATGTGCAATTTAGGAGTTATTGATTTCTTGGCCTTGGGTTATTTGCTGTGTAGTAGTAGTCGTAAGTTGAGTTTGTCAGTTGTTTGGACTTTGGAGAATCATTTGTCTATTACAAAACTATGTGGAACGAAACTTATTGATTTTTATACACAAGTAGATCAATCTATAGTCATTTTCCTGTTCAACAAGTTATCATGTTAACATGACCAACTGCATAATGGATATTTATTGGCTAACATGTTAAGAAAACAGTTTATTTTATCACAATACTTGTTGGCATTTTGGATATTCTTAATTTGTATACTGCATATCTACATTTCACACAGAGACAATTCTCAACAGTATATATATGGTCGGTAGTCACGCCAGTtgttggataattaaataaatgtcATTGTATACAGTTAAGGTTGGTATTTGGTTCGTGAATCATAAAGTTCATAAGATTTTTGCACAGAATAAAGTTGGAGTTAAAAGGTTTAGGTGTTATTATTTGCACCATTAGTTTGTTTCCTGTTTATGTTTGATCAGTGTCTCTTTGTAGATGGTACTTAATTCTTATGATGTTGCTAAATTACGATGCACGTTACTAGATTTATTAATGTACTCTTATACTTGTTGATCCTATTTGTTGATATCAAGTACTGAACAATAGAAGACTGTTTCTGATATCAAACCAGCAGGCACGTTAGTATCTTCGTATACTAATTAAGTAAAGTTGAATtcgaagaaaacaaaaggaaaaaagaactaacttttttcttcttcttaatgcATCAAAAGGCAGAAGTAAATTACCTGGGTCAATTATACCATCCAAATCTTGTAAGACTGATCGGATATTGCATGGAGGATGACCATCACTTACTTGTTTACGAGTTTATGCCTAAAGGGAGCTTGGAAAACCATCTGTTTAGAAGTAAGCATTTTCTgttcatatttaaaaaattaaattaatagctGAAACTTTTGAATCAAACCGTAAAGGCAAGGACTACGTTCCATggcataatttataaatatttcgttgCATGTCATAACATTCGTAGTAAATTGAAAAGGCATCTTGCGGAATAACGCTCTGCAATCGTTGGCATTTAGGTCAAAATCTATGTATATGTTATTGCATCCAGTACCATCATTTTTTGAAGTTTATGCTTTGTGTATCTCAGTCTGTAAAAATAACCATTCTTTTTTAACTGACATTGCTTTGTGTATCTGAGTCTGTAAAAATAACCATTCTATTTAACTGACATTCGTAAGTATAGAGATTAACTCACCACCTTTTCTACTCAGAGAGGGCATAGGTAATGTTATTAGCCTATTTACCTTTAGTAGTTTCCTAGCAAATTTGGACATACTGAAAAAAGCGGGTGCATGTTGTACAGTTGTTCATGTTATCACTGCATCTAACTGGAATATTATGCTTACAGGGAGTTCCAACTTCCAACCTCTTTCCTGGAACCTCAGAGTAAAGGTGGCACTTGGAGCTGCAAAAGGCCTTGCATTTCTGCATAATGCTGAAAATAAAGTCATATATCGTGATTTTAAAACCTCGAACATTCTTCTTGACTCGGTAAGTGGACTATAATCACCGttgttaaattcaaaaataaacaatttGGAGCTAGTGTGCAGTTTGCTCATGTGAATGTCATGCAATTACAGAACTACAATGCAAAACTGTCTGATTTTGGTTTGGCAAAGGATGGCCCAACCGGCGACAAAAGTCATGTCTCAACTCGAGTAATGGGTACACATGGATATGCAGCTCCCGAGTATCTTGCCACAGGTGAAAATGCGTGTAAGTCTACCTGCTAAGTTGCATAGCCATAGCTAATGTTTGTTGTTACAGGTCATCTGACTACAAAGAGCGATGTATACAGCTTTGGAGTGGTCCTTCTAGAAATGATTGCAGGCAAACGTGCAATTGACAAAAACCGCCCAAATGGTGAACAAAACTTAATAGAGTGGGCTAGACCTTATCTTTCCAGCAAGCGCAAATTCTTCAGGATCATAGACCCTAGACTAGAAGGGCAGTTTACGATCTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020252541.1	2.4e-156	probable serine/threonine-protein kinase PBL9 isoform X2
Swissprot	Q65XV8.1	1.4e-143	Receptor-like cytoplasmic kinase 176
trEMBL	A0A5P1FEY8	1.8e-156	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G07570.1	71.78	8e-143	503	APK1;APK1A	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa8G05216	AT1G07570.1	326	85	1	1	326	1	319	71.78	8e-143	503
Asa8G05216	AT1G07570.2	326	85	1	1	326	1	319	71.78	8e-143	503
Asa8G05216	AT2G28930.2	326	81	2	1	326	1	320	73.31	1e-142	502

Ortholog group

Species	Genes
Allium cepa	g170463.t1; g363281.t1
Allium fistulosum	AfisC6G01165; AfisC7G04693
Allium sativum	Asa3G01261.1; Asa8G05216.1
Arabidopsis thaliana	AT1G07570.1; AT1G07570.2; AT1G07570.3; AT2G28930.1; AT2G28930.2; AT2G28930.3; AT5G02290.1; AT5G02290.2
Oryza sativa	LOC_Os01g74200.1; LOC_Os03g16740.1; LOC_Os03g16740.2; LOC_Os03g60710.1; LOC_Os05g02020.1; LOC_Os05g02020.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	79	287	155.6	1.3e-45

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network