Detail information of Asa8G05248


Location
GeneChrStartEndStrand
Asa8G05248chr813930245781393025087+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAFP49820.12.5e-35ethylene responsive transcription factor 6
SwissprotQ9SZ06.12.0e-21Ethylene-responsive transcription factor ERF109
trEMBLK4GQ141.8e-35Ethylene responsive transcription factor 6

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G33710.168.124e-2197.4Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag150233.t1; g150234.t1; g502508.t1; g530854.t1
Allium fistulosumAfisC1G06242; AfisC4G00525; AfisC4G00528; AfisC7G02295
Allium sativumAsa0G01551.1; Asa0G02447.1; Asa3G03031.1; Asa3G03037.1; Asa3G03038.1; Asa4G00588.1; Asa4G00590.1; Asa4G00591.1; Asa5G05309.1; Asa8G05248.1; Asa8G05249.1
Arabidopsis thalianaAT1G25470.1; AT1G25470.2; AT1G43160.1; AT1G68550.1; AT1G68550.2; AT2G20350.1; AT2G40220.1; AT3G25890.1; AT3G25890.2; AT4G34410.1; AT5G67000.1; AT5G67010.1
Oryza sativaLOC_Os05g28350.1; LOC_Os08g36920.1; LOC_Os09g28440.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00847.17AP2Domain6311241.51.1e-10

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09286EREBP; EREBP-like factorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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