Detail information of Asa8G05865


Location
GeneChrStartEndStrand
Asa8G05865chr815316504091531652594+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020244902.11.2e-82protein ATAF2-like
SwissprotQ9LD44.11.3e-60Protein NAC-REGULATED SEED MORPHOLOGY 1
trEMBLA0A5P1FTT08.7e-83NAC domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G61110.158.552e-59 226anac025;NAC025NAC domain containing protein 25

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag346654.t1
Allium fistulosumAfisC6G00150
Allium sativumAsa8G05865.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02365.12NAMFamily1213991.83.3e-26

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12581CNOT7_8, CAF1, POP2; CCR4-NOT transcription complex subunit 7/8EC:- RNA degradationko03018

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.