Detail information of Asa8G06208


Location
GeneChrStartEndStrand
Asa8G06208chr816043583301604360862-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020260084.18.8e-191tubby-like F-box protein 8
SwissprotQ9FRH7.11.6e-168SKP1-interacting partner 26
trEMBLA0A5P1F3I76.4e-191Tubby-like F-box protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G25280.168.995e-168 587AtTLP10;TLP10tubby like protein 10

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag129578.t1; g415497.t1
Allium fistulosumAfisC6G00582; AfisC6G01975
Allium sativumAsa8G04648.1; Asa8G06208.1
Arabidopsis thalianaAT1G25280.1
Oryza sativaLOC_Os01g64700.1; LOC_Os01g64700.2; LOC_Os04g59130.1; LOC_Os05g36190.1; LOC_Os08g01290.1; LOC_Os08g01290.2; LOC_Os08g01290.3; LOC_Os08g01290.4; LOC_Os08g01290.5; LOC_Os08g01290.6; LOC_Os08g01290.7; LOC_Os11g06420.1; LOC_Os12g06630.1; LOC_Os12g06630.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00646.30F-boxDomain509940.61.4e-10
PF01167.15TubDomain115418316.86.6e-95

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K19600TULP1; tubby-related protein 1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.