result

Gene information

Detail information of Asa8G06224

Location

Gene	Chr	Start	End	Strand
Asa8G06224	chr8	1606828122	1606830044	-

Sequences

CDS

>Asa8G06224.1
ATGGACCAAGAGATAAAGAATGCCACAATAGAACAAAACATCGAAGCAGACAAAAACTGTGATGGTACTAGATGCATAAGCTGTGGCGTGAGCTCAAGAGCTACTCCACACATGCGCCGTGGCCCAGAGGGTCGGAGCACTTTATGCAATGCATGTGGGATTGCATGGAGAAAAGGAAAAGTAAGGAAAATAATCGAGACAAACGCTTCTAGGGCAGATGCTGATAACTCAAACATAGTGCCAGAAGTAGGAATGAAGTTTGAAAACGATGAAATGGCATATGAATTCTACAACAAATATGCTGGAATAGTAGGATTCAGTGTCCGAAAGGGCAAGATTTTCAAATGGTCAGGGAACATTAAATCAAGAACATTCGTATGTTCCAGGGAAGGCTATAAAAGGGACAAAAAAGGAGCTAAAGAAGTTAAAAAGCCAAGAGCTGAAACAAGAATAGGATGCCGTGCACAACTGATTATTAAACTTTCCGCAGATAATGTGTATCGAGTAAGTGAATTTGTAGCCGAACACAATCATCCACTTGCACCTCCTTCATCTGTACACTTGTTAAGATCACAACGTGTTCTCACTGAGGTTTGTAGTTCTGAAACTGATTTATCGATCAGTGTGACCCCACCAAATGTGTCTTCTGGTCAAAAAGTGGTTTGTTTCAGGGATATCAACTTTCTACCTAGTGATTATAGAAGCTCTATCGGGAAGAAGAGAATGAAAGAAATGCAGAAGGGAGATGCTGAATCTGTGTTGAAGTATGTTCAGAGCATGCAGCTTAATGATAGGTCTTTCTTTCATGCAATTCAACTCGATGAAGATGATAAAATGACCAACATATTCTGGGCAGATGCTAAATCTATAGACGACTTCAGCTTTTTCGGGGATGTGGTATGTTTAGATAGCACTTATAATGTAAATAGTTACGGTAGGCCATTGGCCTTGTTTATAGGGGCAAATCACCACAAACAAGCTATTGTATTTGGTGCTGCATTGCTGTACGATGAATCGGTCGAATCGTACAAGTGGCTTTTTCATACTTTTCAAATTGCTATGCATGGAAACCCAAAAACAGTTCTTACACAACAGTCTCCAGCAGTAAGTCAAGCACGAACTGTTGTATGGCCAAAGACAAGTCATCTTTACAGTGTACAAAATATTTATTTAAGTTCAGTTAGATACCTTAACCACATATTTCAAAGTTCAAAAGATTTTGCAAAGGATTTTTCCAAGTGTTTATATGAATACGACGATGAAGCAGAATTTGCTATAGCGTGGACATCGATGTTAACTAAGTATAACCTTGTAAACAACGAGTGGCTTTCAAATACATTCAAAGATAGGCAGAGTTGGGCTTCTGCATACATACGTCACATATTTTGCGCGGATATAAACAGCACATTACAGAAAGAGAACTTGAATGTTGAGCTTAAAAAGTATTTGAATGTTCAATTAGATCTTCTATCATTCTTCAAGCATTACGAGAGATTACTGGATGAGAACAGATATGCAGAGCTGCAAGCAGACTTCCATGCCACTCAAAGTTTTCCTAGAATACCGCCTTCAAAAATGTTGACTCAAGCTGCAAATGTATACACACCTAGCATTTTTGAACTATTTCGAAAAGAGTTTGAGGTATTTTTGGATAGCGTACTATGCTTCTGTGGCGACGAGGAAACAATGGGTGCGTACAAAGTTCTTGTTGGGGACAATCCAAAAGAGCATTATGTGAAGTTTGATTCTTCTGATAATTTGATTGTGTGCAGTTGCAAAAAGTTTGAGTTTGTTGGAATTCTTTGTGGCCATGGAATAAAAGTACTGGATGTTAGGAATATTAAGGAGATTCCGACTCGGTATATTCTAAAGAGATGGTGTGTGAATGCTAAAGTTGAAGATGGAAGCAAAGAGGCCAGTTAA

Protein

Gene

>Asa8G06224.1
ATGGACCAAGAGATAAAGAATGCCACAATAGAACAAAACATCGAAGCAGACAAAAACTGTGATGGTACTAGATGCATAAGCTGTGGCGTGAGCTCAAGAGCTACTCCACACATGCGCCGTGGCCCAGAGGGTCGGAGCACTTTATGCAATGCATGTGGGATTGCATGGAGAAAAGGAAAAGTAAGGAAAATAATCGAGACAAACGCTTCTAGGGCAGATGCTGATAACTCAAACATAGTGCCAGAAGTAGGAATGAAGTTTGAAAACGATGAAATGGCATATGAATTCTACAACAAATATGCTGGAATAGTAGGATTCAGTGTCCGAAAGGGCAAGATTTTCAAATGGTCAGGGAACATTAAATCAAGAACATTCGTATGTTCCAGGGAAGGCTATAAAAGGGACAAAAAAGGAGCTAAAGAAGTTAAAAAGCCAAGAGCTGAAACAAGAATAGGATGCCGTGCACAACTGATTATTAAACTTTCCGCAGATAATGTGTATCGAGTAAGTGAATTTGTAGCCGAACACAATCATCCACTTGCACCTCCTTCATCTGTACACTTGTTAAGATCACAACGTGTTCTCACTGAGGTTTGTAGTTCTGAAACTGATTTATCGATCAGTGTGACCCCACCAAATGTGTCTTCTGGTCAAAAAGTGGTTTGTTTCAGGGATATCAACTTTCTACCTAGTGATTATAGAAGCTCTAtcgggaagaagagaatgaaagaAATGCAGAAGGGAGATGCTGAATCTGTGTTGAAGTATGTTCAGAGCATGCAGCTTAATGATAGGTCTTTCTTTCATGCAATTCAACTCGATGAAGATGATAAAATGACCAACATATTCTGGGCAGATGCTAAATCTATAGACGACTTCAGCTTTTTCGGGGATGTGGTATGTTTAGATAGCACTTATAATGTAAATAGTTACGGTAGGCCATTGGCCTTGTTTATAGGGGCAAATCACCACAAACAAGCTATTGTATTTGGTGCTGCATTGCTGTACGATGAATCGGTCGAATCGTACAAGTGGCTTTTTCATACTTTTCAAATTGCTATGCATGGAAACCCAAAAACAGTTCTTACACAACAGTCTCCAGCAGTAAGTCAAGCACGAACTGTTGTATGGCCAAAGACAAGTCATCTTTACAgtgtacaaaatatttatttaagttcagTTAGATACCTTAACCacatatttcaaagttcaaaagaTTTTGCAAAGGATTTTTCCAAGTGTTTATATGAATACGACGATGAAGCAGAATTTGCTATAGCGTGGACATCGATGTTAACTAAGTATAACCTTGTAAACAACGAGTGGCTTTCAAATACATTCAAAGATAGGCAGAGTTGGGCTTCTGCATACATACGTCACATATTTTGCGCGGATATAAACAGCACATTACAGAAAGAGAACTTGAATGTTGAGCTTAAAAAGTATTTGAATGTTCAATTAGATCTTCTATCATTCTTCAAGCATTACGAGAGATTACTGGATGAGAACAGATATGCAGAGCTGCAAGCAGACTTCCATGCCACTCAAAGTTTTCCTAGAATACCGCCTTCAAAAATGTTGACTCAAGCTGCAAATGTATACACACCTAGCATTTTTGAACTATTTCGAAAAGAGTTTGAGGTATTTTTGGATAGCGTACTATGCTTCTGTGGCGACGAGGAAACAATGGGTGCGTACAAAGTTCTTGTTGGGGACAATCCAAAAGAGCATTATGTGAAGTTTGATTCTTCTGATAATTTGATTGTGTGCAGTTGCAAAAAGTTTGAGTTTGTTGGAATTCTTTGTGGCCATGGAATAAAAGTACTGGATGTTAGGAATATTAAGGAGATTCCGACTCGGTATATTCTAAAGAGATGGTGTGTGAATGCTAAAGTTGAAGATGGAAGCAAAGAGGCCAGTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020244856.1	6.1e-244	protein FAR1-RELATED SEQUENCE 5-like
Swissprot	Q6NQJ7.2	1.4e-80	Protein FAR1-RELATED SEQUENCE 4
trEMBL	A0A804L2B9	9.5e-231	Protein FAR1-RELATED SEQUENCE

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G38180.1	34.90	5e-97	352	FRS5	FAR1-related sequence 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa8G06224	AT4G38180.1	576	362	8	68	631	60	634	34.90	5e-97	352
Asa8G06224	AT1G76320.2	552	358	8	85	631	1	544	32.79	3e-81	300
Asa8G06224	AT1G76320.1	552	358	8	85	631	1	544	32.79	3e-81	299

Ortholog group

Species	Genes
Allium cepa	g208673.t1
Allium fistulosum	AfisC6G00589
Allium sativum	Asa8G06224.1
Arabidopsis thaliana
Oryza sativa	LOC_Os03g08370.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00320.24	GATA	Domain	25	61	46.6	1.7e-12
PF03101.12	FAR1	Domain	95	182	83.9	9.1e-24
PF10551.6	MULE	Domain	299	386	69.8	1.9e-19
PF04434.14	SWIM	Domain	566	611	24.1	1.9e-05

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008270	F	zinc ion binding
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K17604	ZSWIM3; zinc finger SWIM domain-containing protein 3	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network