result

Gene information

Detail information of g102170

Location

Gene	Chr	Start	End	Strand
g102170	Scaffold_38401:HRSCAF_421487	56875	59678	+

Sequences

CDS

>g102170.t1
ATGGATAATGTGAACGGCAATAAATTTGAGAGTGCTCTTACTGTTTCAGCTGAGAACTATGTGGATGATAGGAATACGATGCAAGATGATCAGTCAAATGACTCGGAAGATATAAAACGTAGTCATCAGCCAAAGGTAGCAAAAAAGGAAAACATCGTGAAACGACCTAGAGCTAGCGCTACTAGAAAATGTAATTGTCCATTTCGATTGAAGGGTGTGTATGTTGACGAAGACAAATGGAAATTATTTGTAATCAATGGAGTGCATAATCATGAACTTCCTCACTCTTTAGAAGGACATCCGTACGCGGCATGGTTGATGGACATGGAGAAAAAAAATCTTAGAAGACATGAGTTTTGCAGGCGTTCCTCCAAGAGAGATGATCATTGGAGACAGTTAATTTATATTCCACAAGTTGAAGAATCACTTGAGTTTGTCCATACAGCTGAGTTTGCGTACATTAAAAAATTATTTGATTCAAGCACTGCTGAGGAGAGGAAAGTTTTGCTACTGAAGCTAGGAGAAATTGCATTACCAGCCACGACTTCTATTTTGGAACCGAAAATAGAGAAACACAGAGGGAGACCAAGCAGAAGTAAGAACAAATCAATTAGCAAACAAGTCAAACGTCAAAAATCTACAAAATGGGATCCCTCTACTTTGGAGATTGCAAAAACTGCTAATGAAATTCGTTCTCAAGCTAGTGTGAACAAGAAACTACCTCCCAAACAGAAAAACCCCATTGTGAAGTTTGATAGGTGTGATGTAAAAACAAAAAATTCAGATTTTAAGTATTTAGCTTACCTGCAGGCTTTTCTGCATCAATATATTGATAACATTGAAGATGTTATGGGAGATGGCAATTATGGATTTCATTGCGTTGCTGAACAAGTCGACGAATTAAATTCCGTTTGGAGACAAGCAAGGAAGTCGATATTAGCAGAATTGATGAAAAATTGGGATTTATATGTAAGAAATTTTGACATAACAAACTGCGAAGAATTAAAATCAGCTACCGACTACGATAGTAGTCCTTGTTTTAAAGCTAACTGGATGATAATGCCTGAAACTGGATACTTGGTTGCAAATGCATTCAATAGAGTTGTCGAAAATGCACCCATCCCACCGGTCGCTAGCTTTTGGAATAGACTGGCGACTAAAGAATCAAAAGTATGGAGCGAACTATACGTTGATTGGCAAATAGAGTTTGTTAAACTGCGCCCGTCGGATATGGCCACAAAGGATGATCACTAA

Protein

Gene

>g102170.t1
ATGGATAATGTGAACGGCAATAAATTTGAGAGTGCTCTTACTGTTTCAGCTGAGAACTATGTGGATGATAGGAATACGATGCAAGATGATCAGTCAAATGACTCGGAAGATATAAAAGTTGATTTGACAAATCATTTTTACAACCGATGAAGTATTTAGTACTTAATTTACAATCGCTAATGTACGTATAAAAATGAAGCATGTTATTTTTTTTTTGTTAAACCAAGTGATTTCAAGAATTTGATTCGCAGAGCACATTGATCTGGTGGTGTAAAACAACAGGAAAAAAGTTGAATACCATTGTAGTAATTCTAAAGTCCGATAAATTAGGGCGGGGAAGAAAACCAAGGTTACAATTGGGGTGTGAAAGGGCGAGAGTTTAGCGTAGTCATCAGCCAAAGGTAGCAAAAAAGGAAAACATCGTGAAACGACCTAGAGCTAGCGCTACTAGAAAATGTAATTGTCCATTTCGATTGAAGGGTGTGTATGTTGACGAAGACAAATGGAAATTATTTGTAATCAATGGAGTGCATAATCATGAACTTCCTCACTCTTTAGAAGGACATCCGTACGCGGCATGGTTGATGGACATGGAGAAAAAAAATCTTAGAAGACATGAGTTTTGCAGGCGTTCCTCCAAGAGAGGTATTAGTTACCATTGAAAAGTCCTTTCCAGAAAATTCATCAACTTTGAAGACTATCTACAACGCTAAATATAAAATGCAACTATCAACGATGGAGTGTAGATCCGCGATACAATATTTAAAGAAATTGCTTACAAAGAAGCATCATATGTATTTTGATTGAGCTGTATTTTGATCGAGCTGAAGCGGTAACCGATCGTTTGATAGATATAATGTGGTCTCATCCAGAATCGTCCTTATTGTGTAAGTGTTTTCCATCAATCCTTTTGCTTGATTGTACATACAAAAAGAACCAGTATAATATGCCTTTGTTGGAATTGGTTGGTATGACTTCTACGGCCCGAACATTTAGTATTGCTCATGCATTTCTAGCACACGAGAGGGAAGAGAACTACGAATTGGTGCTAACGAAGTTAAAACATTTTTATTTACCGGATAAAGAACCCGAGGTAATAATTTCCGATAGAGAATGATCGTTGACAAATTGAATCAAGAAATTTTTTCCACGGGAAAAGTTGATGATGTGTTTATGGCACATGGGAAATAATGTCATTACGAATTGCAAACCAGAGTTTAAAACAAATGAGGTTTTCGAGATGTTTTTGCAAAGTTGGAAGAAGGTGGTTCATGCACCGACTGAAGATGAATTTTGGATGTACTGCAATGATTTTCAAAAAGATTAGGTAGACTACCCCAAAAGCTTGAAGTACATTCGTAATCAATGTTTGGAATACAAAGAATATTATGCTTTTGCATGGACAAATAAAATTAAACACCGCGATAATAAAACAACAACTCGAGCCGAGTCTTCCCGTGCTCAACTGAAAAAACATCTCGGTTCTAGTGCGACATTTGTCGTATTATGGTCAAAAATGGATAACATGTTGTTTCTGCAACATACTGAAATAAAATCCACTTTTGAAAGAAGCTTAGGAGTGGCACGGATTGCATATCAAGTTCCATTGTTAAAACAACTACGAGGTAAGACGTCTTTTTTGCATTGGATTTGATTGTGAAAGAAATGGGAAAAATTAGTTGTGTTGCTTTGGACGCATCAGTTTGCGATCATTTGAATCGACTTGTCTATGGTTTTCCATGTGCACATGAGATATACAAATATCATAGTGATGGCCTTCCAATCCCAATTAAAATTGTAGATGATCATTGGAGACAGTTAATTTATATTCCACAAGTTGAAGAATCACTTGAGTTTGTCCATACAGCTGAGTTTGCGTACATTAAAAAATTATTTGATTCAAGCACTGCTGAGGAGAGGAAAGTTTTGCTACTGAAGCTAGGAGAAATTGCATTACCAGCCACGACTTCTATTTTGGAACCGAAAATAGAGAAACACAGAGGGAGACCAAGCAGAAGTAAGAACAAATCAATTAGCAAACAAGTCAAACGTCAAAAATCTACAAAATGGGATCCCTCTACTTTGGAGATTGCAAAAACTGCTAATGAAATTCGTTCTCAAGCTAGTGTGAACAAGAAACTACCTCCCAAACAGAAAAACCCCATTGTGAAGTTTGATAGGTGTGATGTAAAAACAAAAAATTCAGATTTTAAGTATTTAGCTTACCTGCAGGCTTTTCTGCATCAATATATTGATAACATTGAAGATGTTATGGGAGATGGCAATTATGGATTTCATTGCGTTGCTGAACAAGTCGACGAATTAAATTCCGTTTGGAGACAAGCAAGGAAGTCGATATTAGCAGAATTGATGAAAAATTGGGATTTATATGTAAGAAATTTTGACATAACAAACTGCGAAGAATTAAAATCAGCTACCGACTACGATAGTAGTCCTTGTTTTAAAGCTAACTGGATGATAATGCCTGAAACTGGATACTTGGTTGCAAATGCATTCAATAGAGTTGTCGTTTATATATCCAACCATCAAGGTTTGACATTTTTTCCACATAAAAGAGGGCCAGGTCTTGGAGACGAGCATCGATTTATTGTTTTTGCAGATATTCTGGACTACACTTTATTAAATTAACGCTTAAGGAAAATGCACCCATCCCACCGGTCGCTAGCTTTTGGAATAGACTGGCGACTAAAGAATCAAAAGTATGGAGCGAACTATACGTTGATTGGCAAATAGAGTTTGTTAAACTGCGCCCGTCGGATATGGCCACAAAGGATGATCACTAA

Functional annotation

Database	accession number	e-value	annotation
nr	MCH80670.1	8.3e-16	protein FAR1-RELATED SEQUENCE 5
trEMBL	A0A5J5RGT1	1.8e-12	Protein FAR1-RELATED SEQUENCE

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
-	-	-	-	-	-

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
-	-	-	-	-	-	-	-	-	-	-	-

Ortholog group

Species	Genes
Allium cepa	g102170.t1; g139819.t1; g156125.t1; g171264.t1; g172179.t1; g205250.t1; g218949.t1; g259799.t1; g265035.t1; g278196.t1; g286549.t1; g297027.t1; g334068.t1; g369023.t1; g374901.t1; g436126.t1; g44488.t1; g461480.t1; g461495.t1; g470844.t1; g473862.t1; g477407.t1; g63925.t1; g71021.t1; g79478.t1; g81586.t1; g82881.t1; g85492.t1
Allium fistulosum	AfisC1G02647; AfisC8G00992
Allium sativum	Asa2G05662.1; Asa2G05667.1; Asa3G02561.1; Asa3G04439.1; Asa5G00572.1; Asa5G04105.1; Asa6G04377.1; Asa7G02505.1; Asa7G05001.1; Asa8G05720.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08731.8	AFT	Family	26	93	27.5	3e-06

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network