Detail information of g102536


Location
GeneChrStartEndStrand
g102536Scaffold_38457:HRSCAF_4215432803148720-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK63535.10.0e+00uncharacterized protein A4U43_C07F16230
SwissprotQ9M1I1.10.0e+00F-box protein At3g54460
trEMBLA0A5P1ECC60.0e+00Condensin complex subunit 1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G54460.153.710.01295SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag102536.t1
Allium fistulosumAfisC2G04350
Allium sativumAsa6G01989.1
Arabidopsis thalianaAT3G54460.1
Oryza sativaLOC_Os01g72310.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00176.20SNF2_NFamily279921309.12.6e-92
PF07496.12zf-CWDomain52356645.74.5e-12
PF00271.28Helicase_CFamily1141123735.87.4e-09

Gene Ontology
AccessionOntologyName
GO:0005575Ccellular_component
GO:0005911Ccell-cell junction
GO:0009506Cplasmodesma
GO:0030054Ccell junction
GO:0055044Csymplast

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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