Detail information of g102667


Location
GeneChrStartEndStrand
g102667CHR5215335630215341794+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020241351.13.3e-103E3 ubiquitin-protein ligase MIEL1-like
SwissprotQ8VZK0.16.5e-88RING-type E3 ubiquitin transferase MIEL1
trEMBLA0A2I0B5911.6e-99RING finger and CHY zinc finger domain-containing protein 1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G18650.168.991e-106 382MIEL1CHY-type/CTCHY-type/RING-type Zinc finger protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag102667.t1; g538065.t1
Allium fistulosumAfisC1G02747; AfisC5G00636
Allium sativumAsa6G05375.1; Asa6G06667.1; Asa7G05619.1
Arabidopsis thalianaAT5G18650.1
Oryza sativaLOC_Os03g22680.1; LOC_Os03g22680.2; LOC_Os12g35320.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF05495.9zf-CHYDomain219378.34.4e-22
PF13639.3zf-RING_2Domain14719035.48.8e-09
PF14599.3zinc_ribbon_6Domain19625285.51.7e-24

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K10144RCHY1, PIRH2; RING finger and CHY zinc finger domain-containing protein 1EC:2.3.2.27 Ubiquitin mediated proteolysisko04120
p53 signaling pathwayko04115

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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