result

Gene information

Detail information of g103561

Location

Gene	Chr	Start	End	Strand
g103561	Scaffold_38555:HRSCAF_421641	652728	654395	+

Sequences

CDS

Protein

Gene

>g103561.t1
ATGGTCTGTCACAACCAAATGGCTTGTAATGGAATGCCTTCTTCTTTTTCATTTTTTCCAACCAGCTTCCATGTACAATTAGAAGCTCAAAATGAACCACAAGATCATCAACAATTCACTCACAGTTCTTCTATCTTCACTCTTCCTTCTAATGCTCAAGAATTTAAAGGTAATTTCGATGCTAACTAACTTAGATTATATCAGCATTGTAGCAGTACGTTTATGATCAATTGTAATTTTTATAGGTGTTGAAGAGGATGATTACGATGATGACTACTCGAAAGCAGGAGAAAAGAAGATGAGGCTGAACATTGAGCAAGTGAGAACACTGGAGAAGAATTTTGAGGTTGGCAATAAATTAGAGCCAGAGAGGAAAATACAATTGGCTAGAGCAATTGGATTACAGCCAAGGCAGGTTGCTATATGGTTTCAGAACAGAAGAGCAAGGTGTAAGACTAAGAAATTAGAGAAGGATTACGATGTGCTTAAGAGGCAGGTCGATGCTATTGAATCAGAGAATTCAGCTCTTCAAGCTCAGAATAATAAGCTACAAGCTGAGGTAACTAATATGCTTGGTTATTCGACCCTTCAAATGTAGAGCCAATATTGAATACTAACTTTTTATGTAGTTATAATTGAACGGTACTATCTATATGTTTTGGATGTAATTTGATTTTTAATGTAAAATAAATTAATTTTGATATTTGGTTACTACAACTTACAAATAATAAATGTAAATCACATTAGTAATCGGATATATCCATGTAAGATAATGGTGAATATTGTATAATTTGCTTGTTGATTTTTCCAAGGAGAAATGTTACTCCACCAATACTTGATCAAAAATGCTTATGAAGTTGTCACAAGTTACAAACAACCAATAGTGGCTTCTTCAATAACTTGTAAGCAACTTAACTAGCTTCTCATTGTACGGTTCCTTCTTATATTGAGTTTCCAAACAAACAAACTTCAAGTAGTTTTGATTAAAATGTAGAAATGTTCACATATATGAGTCGAAGTTGTGATCAAATTTAGTTCTATAAGGTGAAATAAGTCGAAACAGGTATTATTGCTTACAACTTATCAACTACTAGGCAGCTGATACCACTCTCCCTATGCACTGTTTACAAACAATTAAATTCAAGTAAGCAATTAAAAAGTAGTTTTAACTATTTATAATAGATAAATATGTTTAATGATGCAGATCATGGCTCTTAAAAGTCGGGACACATCAGAACTAATCAATTTGAATATCAAACAAAGCGACTCATGCAGCTCTGAAATCAATTTTGACATCTCAAGAACATCGACTATTGATAGCAGTCTTAATCATCAACAAAGCATTCCTTTCTTTGCATCGATAGGGCCACTTTCGAATTCAATGGTACAGGTCTCTGATGAGAATTTCAGTAATTTCCTATGCAATATTGATGATCAATCTACCTGGACATGGTAACAATACTCTTCTACTACCTGAAGAAAATAATATTCATCCTTCGTCCACAAAATATTATTCACAAATTAAATGTGTTTGATGTTGATTCTTCAAGATTGGGGGTTTTAGTTGCATGGTCTTGTATCAAACATTACATTACGAAATCCAACATTTCGTCCTTCCTTTCCTTTTTTTTTTCCTCTCTTTTTTTGTTTTATCTCAAAATACTGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	ONK65242.1	1.4e-38	uncharacterized protein A4U43_C07F35130
Swissprot	Q8LC03.2	1.5e-29	Homeodomain transcription factor ATHB-13
trEMBL	A0A5P1EH75	1.0e-38	Homeobox-leucine zipper protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G69780.1	47.66	7e-50	194	ATHB13	Homeobox-leucine zipper protein family

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g103561	AT1G69780.1	235	85	6	7	209	1	229	47.66	7e-50	194
g103561	AT1G26960.1	210	85	7	7	204	1	206	51.90	1e-48	189
g103561	AT5G15150.1	140	52	2	35	172	76	214	60.71	2e-41	166

Ortholog group

Species	Genes
Allium cepa	g103561.t1; g121794.t1; g13156.t1; g190300.t1; g199438.t1; g252539.t1; g324522.t1; g361130.t1; g41153.t1; g492566.t1; g55488.t1; g59663.t1; g84342.t1
Allium fistulosum	AfisC1G01481; AfisC1G02424; AfisC1G02864; AfisC1G05033; AfisC1G05156; AfisC2G01313; AfisC2G08452; AfisC3G00906; AfisC3G02637; AfisC4G00626; AfisC4G02622; AfisC4G06244; AfisC5G05451; AfisC6G01716; AfisC6G02991; AfisC6G04767; AfisC6G05728; AfisC7G02966; AfisC7G02969; AfisC7G04763; AfisC8G01572
Allium sativum	Asa2G00783.1; Asa3G02473.1; Asa4G00625.1; Asa7G01405.1
Arabidopsis thaliana	AT1G27045.1; AT2G22430.1; AT3G01470.1; AT4G40060.1; AT5G65310.1; AT5G65310.2
Oryza sativa	LOC_Os08g37580.1; LOC_Os09g21180.1; LOC_Os09g29460.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00046.26	Homeobox	Domain	74	126	52.6	2.7e-14
PF02183.15	HALZ	Family	128	167	44.8	9.3e-12

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09338	HD-ZIP; homeobox-leucine zipper protein	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network