Detail information of g10454
| Gene | Chr | Start | End | Strand |
|---|
| g10454 | Scaffold_38628:HRSCAF_421714 | 126773 | 127512 | + |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_026395953.1 | 5.6e-28 | glycine-rich protein 2-like |
| Swissprot | P27484.1 | 1.6e-24 | Glycine-rich protein 2 |
| trEMBL | A0A4Y7IBV0 | 4.1e-28 | CSD domain-containing protein |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT4G36020.1 | 38.84 | 2e-30 | 128 | AtCSP1;CSDP1;CSP1 | cold shock domain protein 1 |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| g10454 | AT4G36020.1 | 224 | 83 | 5 | 1 | 186 | 6 | 213 | 38.84 | 2e-30 | 128 |
| g10454 | AT4G36020.1 | 77 | 32 | 3 | 115 | 186 | 219 | 295 | 51.95 | 3e-08 | 55.1 |
| g10454 | AT2G21060.1 | 186 | 76 | 2 | 5 | 189 | 14 | 198 | 58.06 | 4e-30 | 127 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF00313.19 | CSD | Domain | 7 | 71 | 91.6 | 1.9e-26 |
| PF00098.20 | zf-CCHC | Domain | 127 | 143 | 32.3 | 6.1e-08 |
| PF00098.20 | zf-CCHC | Domain | 172 | 187 | 27.7 | 1.6e-06 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K09250 | CNBP; cellular nucleic acid-binding protein | EC:- | - | - |
| K18754 | LIN28; protein lin-28 | EC:- | - | - |