Detail information of g104806


Location
GeneChrStartEndStrand
g104806CHR4148224379148247906-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020249512.19.0e-154LOW QUALITY PROTEIN: BTB/POZ domain-containing protein At1g21780
SwissprotQ9XHZ8.19.7e-137BTB/POZ domain-containing protein At1g21780
trEMBLA0A8B9AYB44.1e-156BTB/POZ domain-containing protein At1g21780

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G21780.171.381e-141 499BTB/POZ domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag104806.t1
Allium fistulosumAfisC4G03952
Allium sativumAsa5G03434.1; Asa5G03435.1
Arabidopsis thalianaAT1G21780.1; AT1G21780.2
Oryza sativaLOC_Os08g01320.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00651.28BTBDomain16727073.01.9e-20

Gene Ontology
AccessionOntologyName
GO:0000151Cubiquitin ligase complex
GO:0005515Fprotein binding
GO:0019941Pmodification-dependent protein catabolic process
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0005488Fbinding
GO:0005623Ccell
GO:0005737Ccytoplasm
GO:0006508Pproteolysis
GO:0051603Pproteolysis involved in cellular protein catabolic process
GO:0006511Pubiquitin-dependent protein catabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0008150Pbiological_process
GO:0009056Pcatabolic process
GO:0009057Pmacromolecule catabolic process
GO:0019005CSCF ubiquitin ligase complex
GO:0009987Pcellular process
GO:0010498Pproteasomal protein catabolic process
GO:0019899Fenzyme binding
GO:0019222Pregulation of metabolic process
GO:0019538Pprotein metabolic process
GO:0030162Pregulation of proteolysis
GO:0030163Pprotein catabolic process
GO:0031461Ccullin-RING ubiquitin ligase complex
GO:0031463CCul3-RING ubiquitin ligase complex
GO:0031625Fubiquitin protein ligase binding
GO:0032991Cmacromolecular complex
GO:0043161Pproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043170Pmacromolecule metabolic process
GO:0043632Pmodification-dependent macromolecule catabolic process
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044248Pcellular catabolic process
GO:0044257Pcellular protein catabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044265Pcellular macromolecule catabolic process
GO:0044267Pcellular protein metabolic process
GO:0044389Fubiquitin-like protein ligase binding
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0050789Pregulation of biological process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051246Pregulation of protein metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0071704Porganic substance metabolic process
GO:0080090Pregulation of primary metabolic process
GO:1901564Porganonitrogen compound metabolic process
GO:1901565Porganonitrogen compound catabolic process
GO:1901575Porganic substance catabolic process
GO:1902494Ccatalytic complex
GO:1990234Ctransferase complex

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K10523SPOP; speckle-type POZ proteinEC:- Hedgehog signaling pathwayko04340
Hedgehog signaling pathway - flyko04341

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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