Detail information of g106955


Location
GeneChrStartEndStrand
g106955CHR25379910153804465-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPKA61533.11.1e-56Transcription factor VIP1
SwissprotO22873.13.9e-40bZIP transcription factor 18
trEMBLA0A2I0B1557.6e-57Transcription factor VIP1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G43700.148.077e-52 200SUE3;VIP1VIRE2-interacting protein 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag106955.t1
Allium fistulosumAfisC2G08172
Allium sativumAsa6G01126.1
Arabidopsis thalianaAT1G43700.1
Oryza sativaLOC_Os11g06170.2; LOC_Os12g06520.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00170.18bZIP_1Family12418234.71.2e-08

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K20557VIP1; transcription factor VIP1EC:- MAPK signaling pathway - plantko04016

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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