Detail information of g10956


Location
GeneChrStartEndStrand
g10956CHR2325447281325452692-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrKAF3333658.17.8e-30histone deacetylase HDT2-like protein
SwissprotQ9M4U4.13.7e-24Zm-HD2c
trEMBLA0A833VSR85.6e-30Histone deacetylase HDT2-like protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G22650.145.381e-22 103ATHD2;ATHD2B;HD2;HD2B;HDA4;HDT02;HDT2histone deacetylase 2B

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag10956.t1; g225273.t1; g248068.t1; g287439.t1; g425905.t1; g53189.t1
Allium fistulosumAfisC2G01906; AfisC2G04470; AfisC2G07291; AfisC5G01036; AfisC5G06090; AfisC6G05773; AfisC6G05792
Allium sativumAsa0G03696.1; Asa0G05546.1; Asa2G00626.1; Asa2G04028.1; Asa4G05372.1; Asa5G01656.1; Asa6G04429.1; Asa7G04970.1; Asa8G01124.1; Asa8G01253.1; Asa8G01582.1
Arabidopsis thalianaAT3G44750.1; AT3G44750.2; AT5G03740.1; AT5G22650.1; AT5G22650.2
Oryza sativaLOC_Os01g68104.1; LOC_Os05g51830.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03066.12NucleoplasminFamily314328.11.4e-06

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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