Detail information of g109834


Location
GeneChrStartEndStrand
g109834Scaffold_39259:HRSCAF_422345223000230045+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020251216.11.9e-28uncharacterized protein LOC109828685
SwissprotP23949.26.5e-05Zinc finger protein 36, C3H1 type-like 2
trEMBLA0A5P1EKW89.4e-25BTB domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G35290.146.005e-1372.8SAUR79

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag109834.t1; g512195.t1
Allium fistulosumAfisC2G06129; AfisC2G08923; AfisC2G08924; AfisC4G06629; AfisC5G01073; AfisC5G02923; AfisC5G06844; AfisC6G01968; AfisC7G01536; AfisC7G05343; AfisC7G05344; AfisC7G05366; AfisC8G01086; AfisC8G05730
Allium sativumAsa0G02028.1; Asa2G04786.1; Asa3G00810.1; Asa3G00811.1; Asa6G07028.1; Asa7G00567.1
Arabidopsis thalianaAT2G35290.1
Oryza sativaLOC_Os03g07400.1; LOC_Os07g43430.1; LOC_Os12g25770.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00642.21zf-CCCHFamily16318939.04.6e-10
PF02519.11Auxin_inducibleFamily34140323.54.2e-05

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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