result

Gene information

Detail information of g117670


Location
GeneChrStartEndStrand
g117670Scaffold_40240:HRSCAF_423326172414172974-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrMBA0733669.14.8e-32hypothetical protein
SwissprotQ40477.11.4e-28NtERF3
trEMBLA0A7J9BD613.5e-32AP2/ERF domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G15210.150.674e-33 137ATERF-4;ATERF4;ERF4;RAP2.5ethylene responsive element binding factor 4

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Ortholog group
SpeciesGenes
Allium cepag117670.t1; g328345.t1
Allium fistulosumAfisC1G05699; AfisC2G04908
Allium sativumAsa6G02474.1; Asa7G03733.1
Arabidopsis thalianaAT1G28370.1; AT1G53170.1; AT3G15210.1; AT5G44210.1
Oryza sativaLOC_Os01g58420.1; LOC_Os04g52090.1; LOC_Os05g41780.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00847.17AP2Domain227153.12.6e-14

Gene Ontology
AccessionOntologyName
GO:0000160Pphosphorelay signal transduction system
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0001101Presponse to acid chemical
GO:0002218Pactivation of innate immune response
GO:0002252Pimmune effector process
GO:0002253Pactivation of immune response
GO:0002376Pimmune system process
GO:0002682Pregulation of immune system process
GO:0002684Ppositive regulation of immune system process
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006952Pdefense response
GO:0042742Pdefense response to bacterium
GO:0007165Psignal transduction
GO:0035556Pintracellular signal transduction
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005654Cnucleoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006950Presponse to stress
GO:0006955Pimmune response
GO:0007154Pcell communication
GO:0008150Pbiological_process
GO:0042493Presponse to drug
GO:0009605Presponse to external stimulus
GO:0009607Presponse to biotic stimulus
GO:0051707Presponse to other organism
GO:0009617Presponse to bacterium
GO:0009682Pinduced systemic resistance
GO:0009719Presponse to endogenous stimulus
GO:0009723Presponse to ethylene
GO:0009725Presponse to hormone
GO:0009737Presponse to abscisic acid
GO:0009753Presponse to jasmonic acid
GO:0009755Phormone-mediated signaling pathway
GO:0009864Pinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0009867Pjasmonic acid mediated signaling pathway
GO:0009873Pethylene-activated signaling pathway
GO:0009889Pregulation of biosynthetic process
GO:0009890Pnegative regulation of biosynthetic process
GO:0009892Pnegative regulation of metabolic process
GO:0009966Pregulation of signal transduction
GO:0009968Pnegative regulation of signal transduction
GO:0009987Pcellular process
GO:0010033Presponse to organic substance
GO:0010104Pregulation of ethylene-activated signaling pathway
GO:0010105Pnegative regulation of ethylene-activated signaling pathway
GO:0010200Presponse to chitin
GO:0010243Presponse to organonitrogen compound
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010558Pnegative regulation of macromolecule biosynthetic process
GO:0010605Pnegative regulation of macromolecule metabolic process
GO:0010629Pnegative regulation of gene expression
GO:0010646Pregulation of cell communication
GO:0010648Pnegative regulation of cell communication
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0016604Cnuclear body
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0023052Psignaling
GO:0070887Pcellular response to chemical stimulus
GO:0023051Pregulation of signaling
GO:0023057Pnegative regulation of signaling
GO:0031323Pregulation of cellular metabolic process
GO:0031324Pnegative regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031327Pnegative regulation of cellular biosynthetic process
GO:0031347Pregulation of defense response
GO:0031349Ppositive regulation of defense response
GO:0031974Cmembrane-enclosed lumen
GO:0031981Cnuclear lumen
GO:0032870Pcellular response to hormone stimulus
GO:0033993Presponse to lipid
GO:0042221Presponse to chemical
GO:0043207Presponse to external biotic stimulus
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043233Corganelle lumen
GO:0043565Fsequence-specific DNA binding
GO:0044422Corganelle part
GO:0044424Cintracellular part
GO:0044428Cnuclear part
GO:0044446Cintracellular organelle part
GO:0044451Cnucleoplasm part
GO:0044464Ccell part
GO:0045087Pinnate immune response
GO:0045088Pregulation of innate immune response
GO:0045089Ppositive regulation of innate immune response
GO:0045934Pnegative regulation of nucleobase-containing compound metabolic process
GO:0048518Ppositive regulation of biological process
GO:0048519Pnegative regulation of biological process
GO:0048523Pnegative regulation of cellular process
GO:0048583Pregulation of response to stimulus
GO:0048584Ppositive regulation of response to stimulus
GO:0048585Pnegative regulation of response to stimulus
GO:0050776Pregulation of immune response
GO:0050778Ppositive regulation of immune response
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051172Pnegative regulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051253Pnegative regulation of RNA metabolic process
GO:0051704Pmulti-organism process
GO:0051716Pcellular response to stimulus
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0070013Cintracellular organelle lumen
GO:0070297Pregulation of phosphorelay signal transduction system
GO:0070298Pnegative regulation of phosphorelay signal transduction system
GO:0071229Pcellular response to acid chemical
GO:0071310Pcellular response to organic substance
GO:0071369Pcellular response to ethylene stimulus
GO:0071395Pcellular response to jasmonic acid stimulus
GO:0071495Pcellular response to endogenous stimulus
GO:0080090Pregulation of primary metabolic process
GO:0080134Pregulation of response to stress
GO:0097159Forganic cyclic compound binding
GO:0097305Presponse to alcohol
GO:0098542Pdefense response to other organism
GO:1901363Fheterocyclic compound binding
GO:1901698Presponse to nitrogen compound
GO:1901700Presponse to oxygen-containing compound
GO:1901701Pcellular response to oxygen-containing compound
GO:1902531Pregulation of intracellular signal transduction
GO:1902532Pnegative regulation of intracellular signal transduction
GO:1902679Pnegative regulation of RNA biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903507Pnegative regulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2000113Pnegative regulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09286EREBP; EREBP-like factorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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