result

Gene information

Detail information of g118277

Location

Gene	Chr	Start	End	Strand
g118277	Scaffold_40317:HRSCAF_423403	215558	219319	+

Sequences

CDS

>g118277.t1
ATGAGGTTGGAGAGCGAGGTATGCTTTCATGACGATCGTGCTCTTCTAGCATGTATACAAGGTCTTCATCGGAGCGTACAGTTACCAGATTTTGAGCTAGATGTTGTAGATGGAAGGGGAGCTGAAGCTGGGCATATAATTGCCACTACCATTGGTGGTCAAAATGGTCAGCCTAAGCAGGCAATTACATACATAGCAGAACATGTAATAGGAACTGGGTCTTTCGGGGTTGTATGTCAGGCTAAATGCAGAGAAACAGGAGAAATAGTTGCAATCAAGAAGGTTCTTCAAGACAAGCGTTACAAAAACAGAGAGTTGGAAGAAATCTACCTGAATCTCGTTCTTGAATTTGTGCCCGAGACTGTTAATCGTGTTGCTAGGCAGTATAGCAAGATGAGCCAACGTATGCCTCTCATATTTGTTAAACTATACACCTATCAGGCGAAAGGAGAGCCAAACATCTCTTATATATGCTCAAGATATTATCGTGCTCCGGAACTCATATTTGGGGCTACCGAGTACACCACTGCCATTGACTTATGGTCCACAGGCTGTGTGATGACTGAGTTGTTACTTGGCCAGCCTGTGTTTCCTGGTGAGAGTAGCGTTGATCAACTTGTTGAAATAATTAAGCTCCTGGGAACACCAACGAGAGAAGAGATTAAGTGCATGAACCCAAACTATACCGAGTTCAAATTTCCTCAAATAAAGGCTCATCCATGGCACAAGGTTTTCCAAAAGAGGTTGCCACCAGAAGCAGTTGACCTAGTCTCTCGGTTTCTACAGTATTCACCAAATCTTCGATGCACTGCTTTGGAGGCCTGTGTTCATCCTTTCTTCGATGAACTGAGGGAGCCTAATACCCGATTTCCTAATGGTCGCCCTCTTCCTCCTTTATTTAACTTTAAATCTCAAGAGCTAATGGGTGTGCCACAAAATATTATTGAAAAGCTCATTCCAGCACATGCGAGGAAACAAAATTTCTTCATGGCCTTGCAAACGTAA

Protein

Gene

>g118277.t1
ATGAGGTTGGAGAGCGAGGTATGCTTTCATGACGATCGTGCTCTTCTAGCATGTATACAAGGTCTTCATCGGAGCGTACAGTTACCAGTGTATCCAGATCTTCTGGGTAGATTTGGTATTTTATTACTATTTCGGAGTTGTTGAACATACCACTTATCGCAAAATATGGTTTACTTTGCTTTAGGATTTTGAGCTAGATGTTGTAGATGGAAGGGGAGCTGAAGCTGGGCATATAATTGCCACTACCATTGGTGGTCAAAATGGTCAGCCTAAGCAGGTTCAGAACTATTCTTCATTTTTCCTCTTACGCATAACCAAATAATTTTCAGTAGCTAAATATGTAGACATCATTGATCATTCAACAATTGCTCTATCAGGCAATTACATACATAGCAGAACATGTAATAGGAACTGGGTCTTTCGGGGTTGTATGTCAGGTATCTTCCATTTCTTTGTCTAGAGAAAAGGTATATTGATAACCATATGAGAATGTTTTCTTTTTTTCCTTCAGGCTAAATGCAGAGAAACAGGAGAAATAGTTGCAATCAAGAAGGTTCTTCAAGACAAGCGTTACAAAAACAGAGAGTTGTAAATAATGCACATGTTAGACCATCCTAATATTGTTTCTCTTAAGCATTGCTTCTTTTCTACAACTGATAGGGAAGAAATCTACCTGAATCTCGTTCTTGAATTTGTGCCCGAGACTGTTAATCGTGTTGCTAGGCAGTATAGCAAGATGAGCCAACGTATGCCTCTCATATTTGTTAAACTATACACCTATCAGGTATGCCTTATTCATGTTAACATCATATAAAACATAGAAAACAATGTTCACAGAAGTTCTAGCACATTGAATTATGTATATTCTAGCAAATGCAGTGTTGTGACTTAGTGAATTGAATGCTGAGTTTTCATGTCTACATTGGTGTAGATGAATGTATATTTCTAACAAAAACATTGTATCAGATATGCAGATCTCTTGCTTACATTCACAACTGCATAGGCATTTGCCATCGACACATTAAACCTCAAAATTTGCTGGTGAGTTTAGTTTATAAACAATCCCATGGTGGTGCTCATTTCTGTGTATATGTATTTTTGCATTTATTTTTTGAAGTTGCCTGAGTTACAAAAGGTCCTTTCATTCTGCCTGATTATCATATGTGCATTATTATTATTATTTAAAAAAAAAGTGCCTTGGAGAAAAGATTATAACAAATTGTGGTACATACTGTGTTTAAGTGGTGTATTTAGGTCTAATATTGATGTATTGCTTTGGCACTTAAGCAGCCAAGTTCCCCACAAAAGGATTTTTTTTTTTTTTTTTTTTTTCAGATGCTATTTCTAAAATCTCCATGGTATCATTAGAATTTTATGACTGATTAGCTAGCAATAAAAATTGCAATTACACAACATAATCTTACAGTGCTAGCTGATGCAGCGTGAAGTAGAAAAGGAATATAATCGTAAACCACAAAGAAAAAGAAAGTTAAAATAATCATAATAATTTTCTTGGTGTGAATTATTTCTCTTGTTGGTTTGTAATATGCTTTACCTGTTTCAGGTAAATCCACATACCCATCAGCTTAAATTGTGTGATTTTGGTAGTGCTAAAGTTTTGGTAAGTCTTCATCGGCCTTAAGCATATGTATAAAACCATTGAACTAAGTATGAATTGCTATGATATTTGTTACATTGTTCAGGCGAAAGGAGAGCCAAACATCTCTTATATATGCTCAAGATATTATCGTGCTCCGGAACTCATATTTGGGGCTACCGAGTACACCACTGCCATTGACTTATGGTCCACAGGCTGTGTGATGACTGAGTTGTTACTTGGCCAGGTTGTTTGGGATGAAGTCTTTGTGATTATATATAACTGCAATTCATTAGACCTTTCTCTTTTCCCTAATGCAATTTCTTTTTCTCATGTAGCCTGTGTTTCCTGGTGAGAGTAGCGTTGATCAACTTGTTGAAATAATTAAGGTGATGATAACTAAATAATTTTTTCAGTTTATGGTGTATGTTTAAAAGATGGTCTGGTGTTAAATAATGTCAATACAACTATATGATGGAATAATAGCTCCTGGGAACACCAACGAGAGAAGAGATTAAGTGCATGAACCCAAACTATACCGAGTTCAAATTTCCTCAAATAAAGGCTCATCCATGGCACAAGGTATTTTGCATCCTATTCTGTTATGCACCTAATTACACGAGTTAATATGAACGTTCGGTTTTCTAGTCTCTACATCGCTGTGTTTAGGAATTTAATTTTCCCTTTTACTCATTTTCTAGTTATACTTGCATATACATACGTAACGCGATAACTTCACCATGTTTTTTTAAATTAAGATAGTAAAAAAGGTACACAGTATATCTGTTCTTGAATTCTATTTACTTTTCTTGAAGAAAAATAATACATACATATACATATTTATGTTGTTAACTTCATCATAATTAATAAATTAAGAGTTACAATAAAAGCCATTAAAATTCAATGTGTTTCATAAATCTTATTACAATTTGAATTTCCTCAGGTTTTCCAAAAGAGGTTGCCACCAGAAGCAGTTGACCTAGTCTCTCGGTTTCTACAGTATTCACCAAATCTTCGATGCACTGCTGTAAGTTGTATGAAAGTACCTATGTCCATCATTTTTGATTAAAACTCATAAATTGGAGAGAAAAGATTGATGATAAGCATTTTATTTTTCTCAGTTGGAGGCCTGTGTTCATCCTTTCTTCGATGAACTGAGGGAGCCTAATACCCGATTTCCTAATGGTCGCCCTCTTCCTCCTTTATTTAACTTTAAATCTCAAGGTAGCAACCTAACCTTATCCTTACTATTATACAAAAAATATATATCATGTCTATATTTTATGCTTCTTGTTAATAACTCCAGTTTGTACAGTGAAAGTAGGTTATCTAGCTTTGAAATGAATATTGATAAGTTATACTTGACCTAAGAATTAGAGCAAGTCACACTGGTTCAATGTCATAATTCTTAGGTAAGTACATAGGAAGTTTATTTACAAATGATAGCAAGATAATCAAAGAGTCGGTTCATATAGTTGAACTACTCAGTGATAAGCATCTTTGAGTTCCTTTTGTGAATTATCAAGTCTATTTACGTGCACATAAAATTCAAAACTTGCTGACGTGAAGTTGAAAGCTCAGTTTTAGATAGCAAAAGCAAAGAGAAGTAGATATTTCCAGGATGTAATAGATGGGAATTTGACAACTACAAGGAAGCTGCAACCTTCTTCCTAATTGCCATTGCTGTGGATTCACTTCACAACTATCAAAATTTGTTGATTATGATATATCCGTACTGTTAGTACATTATTACCTGCTATGTGCACCCACATATTGTTATGTCACATATACAAGAAAGTTAAAGAAAAAATGTTGAATAATATCATCTAGCTATGTGCACACATGTACAAGAAAGTTAATGAAAAAAAGGTTGAATAGCATTATCTAGCTATTTGCAATCACATATTCAAGACAGTTAATGAAAAAAGGTTGAATGATAAGATACACGGGTAAATTTATGTTGATTTCTTGATGTCATGATCAAACCATTACATTCTTTTTTTTTATTTTATTTTTACTGTTATTTCTCTGTTATTCATTTTGGAATATATGATTCTTAATCTTATCATATTGCAGAGCTAATGGGTGTGCCACAAAATATTATTGAAAAGCTCATTCCAGCACATGCGAGGAAACAAAATTTCTTCATGGCCTTGCAAACGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_031490979.1	3.3e-148	shaggy-related protein kinase kappa-like
Swissprot	Q9FVS6.1	1.5e-142	Shaggy-related protein kinase 42
trEMBL	U5DHR5	1.5e-147	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G09840.1	66.49	7e-145	509	AtHIR1;ATSK41;HIR1;SK41	shaggy-like protein kinase 41

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g118277	AT1G09840.6	373	57	2	30	334	49	421	66.49	7e-145	509
g118277	AT1G09840.5	373	57	2	30	334	49	421	66.49	7e-145	509
g118277	AT1G09840.4	373	57	2	30	334	49	421	66.49	7e-145	509

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	66	116	27.3	2e-06
PF00069.22	Pkinase	Domain	153	280	74.4	8.5e-21

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0016020	C	membrane
GO:0005623	C	cell
GO:0044464	C	cell part
GO:0071944	C	cell periphery

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K03083	GSK3B; glycogen synthase kinase 3 beta	EC:2.7.11.26	ErbB signaling pathway	ko04012
			Wnt signaling pathway	ko04310
			Hedgehog signaling pathway	ko04340
			Hedgehog signaling pathway - fly	ko04341
			Hippo signaling pathway	ko04390
			PI3K-Akt signaling pathway	ko04151
			mTOR signaling pathway	ko04150
			Cell cycle	ko04110
			Focal adhesion	ko04510
			Signaling pathways regulating pluripotency of stem cells	ko04550
			T cell receptor signaling pathway	ko04660
			IL-17 signaling pathway	ko04657
			B cell receptor signaling pathway	ko04662
			Chemokine signaling pathway	ko04062
			Insulin signaling pathway	ko04910
			Prolactin signaling pathway	ko04917
			Growth hormone synthesis, secretion and action	ko04935
			Thyroid hormone signaling pathway	ko04919
			Melanogenesis	ko04916
			Dopaminergic synapse	ko04728
			Neurotrophin signaling pathway	ko04722
			Axon guidance	ko04360
			Circadian rhythm - fly	ko04711

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network