Detail information of g118893


Location
GeneChrStartEndStrand
g118893Scaffold_40368:HRSCAF_423454143682175080+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020255736.11.2e-160LOW QUALITY PROTEIN: uncharacterized protein LOC109832740
SwissprotQ9LME6.17.0e-17Methyl-CpG-binding protein MBD8
trEMBLA0A5P1F6R55.1e-97C2H2-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G22310.134.888e-21 100ATMBD8;MBD8methyl-CPG-binding domain 8

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag118893.t1; g19838.t1; g459226.t1
Allium fistulosumAfisC1G03338; AfisC8G02187
Allium sativumAsa1G03043.1; Asa5G03476.1; Asa7G03569.1; Asa7G03570.1
Arabidopsis thalianaAT1G22310.1; AT1G22310.2
Oryza sativaLOC_Os08g37904.1; LOC_Os08g37904.2; LOC_Os08g37904.3; LOC_Os08g37904.4; LOC_Os08g37904.5; LOC_Os08g37904.6; LOC_Os08g37920.1; LOC_Os08g37920.2; LOC_Os09g29750.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
-------

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.