Detail information of g123940


Location
GeneChrStartEndStrand
g123940Scaffold_40998:HRSCAF_424084495584496894-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010926215.13.1e-90mitogen-activated protein kinase kinase kinase 18
SwissprotQ9ZVP5.15.9e-62Mitogen-activated protein kinase kinase kinase 18
trEMBLA0A6I9RGN72.2e-90mitogen-activated protein kinase kinase kinase 18

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G26890.143.191e-69 261MAPKKK16mitogen-activated protein kinase kinase kinase 16

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Ortholog group
SpeciesGenes
Allium cepag101987.t1; g123933.t1; g123940.t1; g123955.t1; g501304.t1
Allium fistulosumAfisC3G08816; AfisC3G08820; AfisC3G08821; AfisC3G08824; AfisC3G08826; AfisC3G08827; AfisC6G00245
Allium sativumAsa0G03825.1; Asa2G03244.1; Asa2G07284.1; Asa2G07285.1; Asa2G07286.1; Asa2G07291.1; Asa2G07296.1; Asa2G07297.1; Asa2G07299.1; Asa2G07316.1; Asa8G05772.1
Arabidopsis thalianaAT1G05100.1; AT4G26890.1
Oryza sativaLOC_Os01g50370.1; LOC_Os01g50400.1; LOC_Os01g50410.1; LOC_Os02g21700.1; LOC_Os05g46760.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain6252180.63.4e-53

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K20716MAPKKK17_18; mitogen-activated protein kinase kinase kinase 17/18EC:- MAPK signaling pathway - plantko04016

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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