result

Gene information

Detail information of g123954

Location

Gene	Chr	Start	End	Strand
g123954	Scaffold_40998:HRSCAF_424084	779564	786997	+

Sequences

CDS

>g123954.t1
ATGAAAAGAAAGGAGGGATTAGACGAAAGCGACAGGATGTGTAGATGGAAGGTGAATGATGACAAATCTACAGTGATCTGCGATCATCACAGACTTGGTAGGCAAGAGCCAAAGACCTTTACAAAATCTCATAAGTCAATTCATAAAATTCAACCCCCTTTGTGGTTTCTTCTCCCTTGGCTTTGCTCAACCAACAACCACATCCATTTGCATATTTTGCCTACCACCAAACCACCTAACGTCTCACATTTCGGCACCTTTCACCTCTCCAACTCAAAAGTCTCAACTCCCATCAAACAAAGAAAAATGCCTAATTGGAACAAGGGTCCATTCCTCGGCCGTGGCTCAACTGCCATCGTCTCCCTCGCTTCCGATCCTACCTCCGGCCAACTCTTCGCCGTTAAATCAACAAGCCTCTCAAACTCCGGATTCCTTCAATATGAAAAGAGCATTCATTCTTCAGTCTCCTCTCCTCATATAATCTCTTACTTAGGATGCGATTCAGACGATGACTTCTACAATCTCTTTCTCGAATACGCCTCTGGTGGGTCCATCTCCGACGTGGTCAGGAAACAAAAGCTTCAGGAATCCGAAATCAGATCCTTCGTGAAAGACATTTCGCTTGGATTGAGTCATCTTCACTCCATGCAAATCGCCCATTGCGACGTTAAATGTCAGAACATACTCATCTGTGCCGATGGAAGAGCAAAAATCGCAGATTTAGGTTGCGCCAAGTTTATAGACTGTGATAATCAAATTAGAGCAAAACTAAGGGGAACGCCGATCCATCGTGTTGGTGCAATGGAAGACACATGGATGGACGTGAGTCAAGGTGGAATTCTGTTGGGATGTCTCGTGTTGTGTGTGGAACCGATGGTAACGTTTGGTATAATGGAATGCGCAAGAAATCTGCAAATCATGGTGGCTACCCGTGCAGGTTTAAGTAGTGAGGCTTATGGTGGAGCAGGATTATGGGACTTTGGATCTGGTAGAATGACATGGGAGCAGAGTCTGGATATGGTGTAG

Protein

Gene

>g123954.t1
ATGAAAAGAAAGGAGGGATTAGACGAAAGCGACAGGATGTGTAGATGGAAGGTGAATGATGACAAATCTACAGTGATCTGCGATCATCACAGACTTGGTAGGCAAGTGTTACACCCGTATTTCTCAAAGTACGTTAAATATGGGTAATGAAATGTATGAGGCTAAGAGAACAGCTCTCACGGTAAAGGTTAAGACAAAAAGAGAAGGTATTGAAGTAATCTAATCGATCTTGCACGATAAGTCGGGAAGAGAAGCGAGCCGCGTAAGGTTGCGTTCAGCTATTTAATCGAAGCCTTATTACTAGCTCCAAGACTGACTACAAAATACGACAGCTAGCCTGTAGTAATGACACATAACTTAACTAAAAGAACTGCAAATAAAAAAGAAAGAAGTCACAACAGAATATAATACTACGCTCGTAAAGAAGGCCACGAAGATATCAGATCTGCACCCATCCTTTAGTTTCCATATAAAATTATGAAACTAACATCAAAATCTAACATAGTCATAAGAAGCAGGCAATGGTGTTCTACGTTTAGGAGCCACAGTAAATGGATGATTGAACTGTACTATCAACATCCCTAGAACTTATAATTTGTTAACACCTTCAAGAGCGGATTTATATCGCACATACTAAGGGCTACCTAAGCAGTACCGCACGGAGTCAGAAGCATCCCAAAAGGGGGTAAATAGGACATCTTAAACAACGCTCCAACGTAGATCCATACTTATGAGTAGATAGCAAAGGTATAAACCACCTTTATCAATCACTCAAACGTATTAGCAACAAGGACAACTCATGTCGCAGTCTGCTCAGATCATGTTCGTACGTGTATTGAACTAACTTTCAGGTTAAGGCAAGGCAGCATAACTTTATTTATCCCGACATAATATCACTCAAGCAAGTACAAACTAGATTAACAACAAAGGTATATGCATGCTTTAACAGCAAATCATGCACCCTGAAGCCCAAAGCAGCTCAGGACGATCACACCTAAGTATCAGGCAAGCACCGCAGCATCATGCAAGTATCGCACATCAATCGGTGCAGCCTCTCTCCAAATATGTTGGCAGTACGTCAACACCAACAGGTAACTCTTAATGTCCTCCTAAGGCAGTGTGCAATCCCTCCGCTTTTTCAAATTCGAAATATATGATCTGTTAAAGTTTGAGTTTCCGGCTCCAATTTCATATATTCCTACTTCAATTTTACGAGTTTTCGCCTTTATCTCAAACTACTCGCCAAAGACCATAATTCTATCGCCTAAATTATGGCTTCCCTCCAAAGGCATCTCAGCAATTCAGGTGCATGAAACAAACAATAATGCGGATGTAGGACACGTAGTATGATCCAAAAGCGAAAACACAATAGGGGAGGAAGGATGGTGGCAATCGACGTACACCCTTTACACAATAAATAGGAGATGATATAGAATATTGTTGGGGGCCTTTTCTTTTATGGGAATTGAGAAAATTGTATCTTTCTATCTTTTTCAAGCACTTGTATCAGGAGAAAATATATAAAAAAAGACTTGATATGTGGACGTATGATTCAAAGAAATCTGAACCACGTAAAAATTTCCATGTCTTCTTACTTTCATGCTTTATTATCTGTTTGTATTGCATTAGATTGTAACTCATTAAACTAATATGAATTGGATTTGACATTCTAACAAACTGCTGAAGTGGAACTACATAATCATGTAAGCATCCAACGACATGATTAGTAAGCAAAGTCGATCTTAATATTCAAATTTGTGAAAGAAAGTTAACAATTACTTTCCTAATCAATTGAGATGTTGTGAGACCAAAAATCTCACCGGCAATAACGATAATATAAAATAACCAAAATAAAATTCAATTAAAGGAATTTATACTAAAAAACATTCATCAAATCAAGTTAACAACAAGTGTGATTTAATGTAACCAGATTATTGTTGAAAATACAAGCAAACGGTCTAACGCAATCGTTAGCAGAGGATTGTTTAAGGTTTTCATTTTTTCCCCTTTGTGGTCAATGACTAAATTATGTTTATTGCCTTCTTTCTGAAGTATGAAAAATAAAATTCTAAGTTGTCTAACCATAAAACATCAAATGTTGTGTTTTGCCTGTACAAAGTATAACTTTTCCTATAAAAAATAAAGCCAAGTTCTCAAGCAACAAGTAAAGACTTATAATTTAATTATTACGTCCACCGTAAATTTCTAGTCAATTTGAATATTTCAGATTAAGAAATGTTCATGTTTTGACCTTTGTATTTTTCAGGCTGGGCAAAAGGAATCACAAAGTTCAAAGTAAATAACAATATTCTCTAGGAGCCAAAGACCTTTACAAAATCTCATAAGTCAATTCATAAAATTCAACCCCCTTTGTGGTTTCTTCTCCCTTGGCTTTGCTCAACCAACAACCACATCCATTTGCATATTTTGCCTACCACCAAACCACCTAACGTCTCACATTTCGGCACCTGTCCTCAATTGGACGGCTTTCTTCCTATTTAAATTTTCGCCTTAGTTCACCTCTCCAACTCAAAAGTCTCAACTCCCATCAAACAAAGAAAAATGCCTAATTGGAACAAGGGTCCATTCCTCGGCCGTGGCTCAACTGCCATCGTCTCCCTCGCTTCCGATCCTACCTCCGGCCAACTCTTCGCCGTTAAATCAACAAGCCTCTCAAACTCCGGATTCCTTCAATATGAAAAGAGCATTCATTCTTCAGTCTCCTCTCCTCATATAATCTCTTACTTAGGATGCGATTCAGACGATGACTTCTACAATCTCTTTCTCGAATACGCCTCTGGTGGGTCCATCTCCGACGTGGTCAGGAAACAAAAGCTTCAGGAATCCGAAATCAGATCCTTCGTGAAAGACATTTCGCTTGGATTGAGTCATCTTCACTCCATGCAAATCGCCCATTGCGACGTTAAATGTCAGAACATACTCATCTGTGCCGATGGAAGAGCAAAAATCGCAGATTTAGGTTGCGCCAAGTTTATAGACTGTGATAATCAAATTAGAGCAAAACTAAGGGGAACGCCGATGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGTGGTTGTTTAGCTATTGATTTTTGAAGTTATTAGATCTACTGTTTCATCAAAAGAAGCATGCACAGAAAAGAGGAAAGAATAAGTATGGGTTTCTTTGAGTTATAGGGTGAACTAAACATGTTGAGCGCACACATTCATTCACATATTACATATCAAACATAGTAACGCTTTTCGTAGATCACTTATTTATTCATATCCACACACACACACACACACACACACATATATATACATATACATACATACATATATATAAAGTAACATCCTGTAACAAATATAAAGTTGTTTTACTCACGGTTTAAAGAATAATGAACACTGCTGCTTTAAGTCTTCAAGCTCTGAATAACTCAGACTTTTTAATGTTAATGGCAAATCTTTTATCTTGTTTTTTTGTAAGAAAAAGTGAACAAGCTCAGCTATGTATATATAGAGAGGATGAAGTGAAACAGTGAAGTATAGGGTTGCTAAGCACACATATTGGGTGGCTGAGAGGCATGTACAGGTTTCGCATTTCCATATTTATTTTTGTTTTGCTTTTTTCGTTTTTTTATTTCTTTTGGGGGCTGATTTGATTTCGTTAGGGGCAGATTTGACTTTATAAGTTGATTTGATTTTATAGGTTGATTTGATTTTCTATTTGGGCTTGATTTGAAATTGTCATCATGAAGCTTGTATATATACATATGGATATTTTGTCATAAATAAATAGTGAAGCTTACAAACATACTTATATATATATATATATATCATATTCAAAAATTGGCTTTTGAAAAAAATTATTACTTCCAAAATTTATATGTTCAAATATCTCCAACATCAAAAAATTTAATTATTTGAGCTATAAAAATCAATATTTTAATGTTTAAAACCAATTAATTATCATAATAATAAATGCTAAATCCGAGTCGTTACAAAAATTTGCCCAGTTCTGTAATGGAATATCTTGATAGATAAACAGTAGAGGAAGCATTTGAAGATTCTCAAAGTTGGGAATAGTAATTAATTTATGTCATAAGAATTCACCAACTATTGTGCATCTGAGCTTGTAGTTAGAGATTTTTCTATTTTTGTTGAATCACATTGTTATAGAAAGGCGGACAACATGTGTTAGGTATTATGGGAAAGAGCAATGAGCTTGTGAACGACCGTTGGTCTAGAAGAGGATTGAGCAGAAGCGATATCTGTGGCAGTATTTCTCATTAACCATACACCTTTTATTGTCGTAGATATGGAGATCCAAAAAGAGATATGAAAAAGTGAGCATGTTGATTATTCATTCCTTAAAGTTTTGGTTGTTCAGCTTATTTAGAAGATGAGAGATATGATATGTTGAAGCTTAGGGAAAGCAAGCATATTTTGTTAGGCTATAGAGAAGGAGTTAGATGTAAAGGTTATGGCGTAAAGGAGAATTGTGACTAGTAGGCATGCAATATTTGATGAGAGATCTTTGTTGAAGGTGGAACCTCTATCAAATGATGACATTGGGAGGACAGAAAATTGCTAAACACATTTAGAGTCATCGGATTATTTCCATATTCGGAGAGATATTAGTATTTCCGATGACGTGTTTGATGAGAAGATTACAGATGTTCAGACTCTACATGGAGCCAACTTGCTGGAAAGGCCTTCTGGTTCTGTTGGCCCTATTTGTAAGCATATTTGTAGCGATGTTTTTTCAACTTATGCTTTGAATGTTGCAGAGCTTATTGTTGAGTCTGCTGGTGTTTACTTAGAATAGTTTAGCTAAATTCTCGTGGAGAAGATTGGAGTAGATGACATTGAGTATGACCTCACTCAATTTGGAATGGAGAAGGTAAAGCCACTGTGAAATCTCCATTTGTCTCTCAAAGCTTAGTATCTACATATTCATCTCCAACATCATATTTATGGAAGAATTTAGGTATTTCTCGTATGCATTTTGTTTGTTGACGTGCATACTATCTTTCTTATGCTTGGAAAAGATTTTGAAATTCTGTTTTGGCAACAATGTCCAAACTTGTTCATCTTGAGTTCGATGCCATGTGGCGTAGAACTAACAATTTGTTAAGATGTGGTGATGAGGAGAGATTGTTATATTTGAATCAATGTAGAATATTAAATTTAGGCGATTCAAAATTTTTCCAAAGAAGAAATAATTTAGCTAATTGAACTTATAAATCAATTAGATTATGGGTAGAAAGAAAAAAGAGGAAAGTTATGTGTGATTGTTCTTAAAGAAAGGAAACTAAATAATTAGTTAATCAATTAATTAGTCAAAAGATTTGTTATATGGAGATAGAAAAGTTTATGCATGGAGATTCAATCAATTGATATAAATTATGGAAATTAAGATCATCATTATCCATTTGCGTAGAAGTCAAATCATGAATATTAGGAAAGGTTTCAAGACAATTAGGCAATTAATTTTCATAATCTCCAAGTAATCCTTCATTTTCAAGCTTGTTTAAATGAAGGAAGTTCATCTTCTTATGTTATATGAGAGAGCATGCACCATTATCCTCTTCTTCAATAAACCCTAATTTTTATAGTCAAATCAAATTAGGGGTTGAGCGCAAACAAATCTTTGGAGAAATTGATTGTTGGGGTGTCTCGCATTGTGCGTGTGTAATGGGCACATATTGAAAAAAGAATATCCCAAATGAAAAATAATGAAGGTGAAGTGGTATATATATGAGTTTGGTTGCATGTAGAAAAAAGGATTTCTTTTGTAAAAGGTGTTGGCCAAACTCATATGTTGCCCCACGTAGGAATGTGCGAACATGATTTCAACATAATATTAGAGTCGATGGTAACGCATGGGACAATGGACAATGCGCAAGAGATTTGTAAATCATGGTGGTTAGTGGTGTAGTCTTAAGTAGTCAGATTTAAGATGGAGCTTGACCATGGTACGTAGGATCTGGTAGAATGACAAGAAAGCAGAGTCTCGATATGGTGTAGCCATCGTGTTGGTGCAATGGAAGACACATGGATGGACGTGAGTCAAGGTGGAATTCTGTTGGGATGTCTCGTGTTGTGTGTGGGTAATGGATACATATTGGAAAAAGAATAGTCCTACATCGTGAAATATAATGGAGGTGTAGTCGTGTGTGTATATATATATATATATATATATATGATTTTTTTGCATGTAACAACAAGGGATTTATTTAGTTAAAAGATGTTGACCAAACTCATATGTTGCCCTACATAGGGATGTGCAGATCGGATTTTAACATGGTATCAGAACCGATGGTAACGTTTGGTATAATGGAATGCGCAAGAAATCTGCAAATCATGGTGGCTACCCGTGCAGGTTTAAGTAGTGAGGCTTATGGTGGAGCAGGATTATGGGACTTTGGATCTGGTAGAATGACATGGGAGCAGAGTCTGGATATGGTGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010926215.1	7.0e-37	mitogen-activated protein kinase kinase kinase 18
Swissprot	Q9ZVP5.1	2.0e-28	Mitogen-activated protein kinase kinase kinase 18
trEMBL	A0A6I9RGN7	5.0e-37	mitogen-activated protein kinase kinase kinase 18

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G55090.1	47.85	3e-33	139	MAPKKK15	mitogen-activated protein kinase kinase kinase 15

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g123954	AT5G55090.1	163	75	5	105	261	5	163	47.85	3e-33	139
g123954	AT4G26890.1	163	74	4	105	261	4	160	47.24	5e-33	138
g123954	AT1G05100.1	204	94	6	105	287	2	195	38.73	1e-31	133

Ortholog group

Species	Genes
Allium cepa	g123954.t1
Allium fistulosum	AfisC3G08823
Allium sativum	Asa0G03974.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	109	256	102.5	2.2e-29

Gene Ontology

Accession	Ontology	Name
GO:0007017	P	microtubule-based process
GO:0000226	P	microtubule cytoskeleton organization
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0001932	P	regulation of protein phosphorylation
GO:0001934	P	positive regulation of protein phosphorylation
GO:0003674	F	molecular_function
GO:0051726	P	regulation of cell cycle
GO:0003824	F	catalytic activity
GO:0007010	P	cytoskeleton organization
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0007165	P	signal transduction
GO:0035556	P	intracellular signal transduction
GO:0005623	C	cell
GO:0005737	C	cytoplasm
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0006950	P	response to stress
GO:0006996	P	organelle organization
GO:0007154	P	cell communication
GO:0007346	P	regulation of mitotic cell cycle
GO:0008150	P	biological_process
GO:0009893	P	positive regulation of metabolic process
GO:0009987	P	cellular process
GO:0010562	P	positive regulation of phosphorus metabolic process
GO:0010604	P	positive regulation of macromolecule metabolic process
GO:0016043	P	cellular component organization
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019220	P	regulation of phosphate metabolic process
GO:0019222	P	regulation of metabolic process
GO:0019538	P	protein metabolic process
GO:0023014	P	signal transduction by protein phosphorylation
GO:0033554	P	cellular response to stress
GO:0023052	P	signaling
GO:0030865	P	cortical cytoskeleton organization
GO:0031098	P	stress-activated protein kinase signaling cascade
GO:0031122	P	cytoplasmic microtubule organization
GO:0031323	P	regulation of cellular metabolic process
GO:0031325	P	positive regulation of cellular metabolic process
GO:0031399	P	regulation of protein modification process
GO:0031401	P	positive regulation of protein modification process
GO:0032147	P	activation of protein kinase activity
GO:0032268	P	regulation of cellular protein metabolic process
GO:0032270	P	positive regulation of cellular protein metabolic process
GO:0033674	P	positive regulation of kinase activity
GO:0036211	P	protein modification process
GO:0042325	P	regulation of phosphorylation
GO:0042327	P	positive regulation of phosphorylation
GO:0043085	P	positive regulation of catalytic activity
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0043549	P	regulation of kinase activity
GO:0043622	P	cortical microtubule organization
GO:0044093	P	positive regulation of molecular function
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0045859	P	regulation of protein kinase activity
GO:0045860	P	positive regulation of protein kinase activity
GO:0045937	P	positive regulation of phosphate metabolic process
GO:0048518	P	positive regulation of biological process
GO:0048522	P	positive regulation of cellular process
GO:0050789	P	regulation of biological process
GO:0050790	P	regulation of catalytic activity
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051173	P	positive regulation of nitrogen compound metabolic process
GO:0051174	P	regulation of phosphorus metabolic process
GO:0051246	P	regulation of protein metabolic process
GO:0051247	P	positive regulation of protein metabolic process
GO:0051338	P	regulation of transferase activity
GO:0051347	P	positive regulation of transferase activity
GO:0051716	P	cellular response to stimulus
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0065009	P	regulation of molecular function
GO:0071704	P	organic substance metabolic process
GO:0071840	P	cellular component organization or biogenesis
GO:0080090	P	regulation of primary metabolic process
GO:0097435	P	fibril organization
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K20716	MAPKKK17_18; mitogen-activated protein kinase kinase kinase 17/18	EC:-	MAPK signaling pathway - plant	ko04016

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network