result

Gene information

Detail information of g13136

Location

Gene	Chr	Start	End	Strand
g13136	CHR2	43274994	43282235	-

Sequences

CDS

Protein

Gene

>g13136.t1
ATGGCACATTATATTGCTATCTGCAGTTTAAGCATCTTAATCATATGGCTTATCAAACTATTTCAGCGATGGAGGAATCCAAGATGCAATGGAAAACTGCCACCTGGATCCCTCGGCTTTCCTCTTATTGGCGAGACATTTCAGTTTTTTGCACCCAGCACCACATTCGACATACATCCTTTCGTAAAAGAGAGGATGAACAGGTATGCCCACTATATTGGTGTTCTTTTATTGTACTTTGATGTCCAGTTCATGTACTACAATGACCCTTACTGCATACATTATATAAGATTTAGCATGTGTTTCAAATTAATTTACTTGGTTTCAGATATGGGCCTGTATTCAAAACAAGCTTAGTTGGGCGACCAATCATTGTATCAACTGATCATGAGCTGAACAATTTTGTGTTTCAACAAGAAGGAAAGTTGTTCCAGAGTTGGTATCCAGATACATTCACTGAAATATTTGGTCGTAACAATGTGGGGGAATTGCATGGCTTTCTATACAAATATTTGAAGAGCTTAGTGCTTAAATTATTTGGTCCTGAAAGCCTGAAAGAAAGGTTACTAAGTGATATTGAGAAGTCGGCTTGCATTAATCTTCGTACCTGGTCACTGCAGCCTAGTGTTGATCTCAAAGAAGGAATAGCCACGGTACGCGCTATTTTTTTTCCCAAAGTTGATATTGTCCTTCGAGACTATTGCGACTAAACTTTATTTTTAACATTACAGATGATATTCGATCTCACTGCTAAAAGGTTGATTAGTTATGATCCATCAACTTCATCAGAGGATCTCAGACATAATTTTGTTGCTTTCATAAAGGGACTCATCTCTTTTCCAGTAAATATTCCAGGAACAGCTTACAATAAATGTCTACAGGCATGTTGAGTAATATTTCATTTTATACTTGTAATAACAAATTTTGGTTAATATTGACGTGTAACTTTTTCTACAGGGAAGGAGAAAAGCAATGAGGGTTCTTAAACAAATGTTAGCAGAAAGGAAAAGCAGACCAAATAGGCAATGCAATGACTTTTTCGATTATGTTGTTGAAGAACTAAAGAAAGAAAGACCAGTCTTAACAGAATCAGTCGCTTTAGATTTGATGTTTGTACTTCTCTTTGCAAGCTTCGAAACTACTTCATTAGCATTGACATTGGCTATTAAACTAATAGCAGATCATCCTAAAGTTTTGGAGGGACTCACGGTTAGTGATGTTTCGTGTTATCATGTTAGTTCTAGTCAAAATTTATTTATAATCAAAATATTTTTCAGGACGAGCACGAAGCCATAATAAGGAACCGTGAGGACCCAGAATCTGAAATTACGTGGCAGGAATATAAATCAATGACTTTTACGTTACAGGTACTGAATAAATAACTACAATTAATATGGACTTTTTTTTTCCCATGACATATTACTTATGGTTTGCCGCTGTTTGATATAGGTCATCAATGAAACCGCCCGGTTGGCGAATATTGTGCCAGGCATTTTCAGAAAAGCGCTGAAAGAGATCCATGTAAACGGTATAATATATCATATCACATTTCATGTTCGTGTATAGTTACTGTTTATATATTCCTGACATTTTATACTATGTTTGACAGCATACACGATTCCAGCTGGATGGGGAGTTATGGTTTGCCCTCCAGCTGTTCACTTGAATTCTGAAATATTCGAAGATCCGCTTTCTTTCAATCCATGGAGGTGGAAGGTTAGTTGTGCACATCGAGCTAGCATTTTCATATCTTAATAAACTAGTGATCGAAAAAGAAAAAAGAAAATCTGCGCTCTTGAATAAACAAGAACAACTAAGCATAAAAAACCGGATATACAAGCTGTAAATAATGTTATTCAAATGTCTTTGATTCCTTTCTTGGCCAAGTAACATTGCCAGTTCGTTGTTGTTTCTCTAAGTAACATACTCAAGTGCTAATGATTGTGATATAGGTCAACTCAATGCAAATAATTAATTAGCTGCAACTATAATTAGATAATTTAAAATCAATCGTGCACCTATAATAATATTCAATGAACTGGATACATGCAGAACAAAGCAGAATTAAATGGAGGGTCTAAGAATTTCATGGCTTTTGGTGGTGGGATGAGATTTTGTGTAGGAACAGATTTCACTAAACTTCAGATGGCTGTTTTCATCCATTGCTTGGTTACGAAGTATAGGTAATGCCACGGCGACATACAAAAATGTTTTTAAAATTAAACGGTTCTAACGAAGTTGGTAAAGTTTATGACTATTCTGTTTCAATTTACAGATGGAAAATGATCAAAGGAGGAAATATTATTCGAACTCCGGGATTAGGATTTCCAGACGGTTACCATGTTGAGCTTTTACCAAAAGAATGAAAATACTTCAACATATATGCATAGCAGTGTGATTTTAGATAGAGATATATACACAATAAAATATACAGTGAATTAATCAAGGAAGATGGCATTTGAATACCATTCATTAATCAGGATTCAGTGCATTTTTCCAATATACTTGTAATGGTTTGGTGTTTGTATCTGCTATAATTGAGATGCCAGATTGTATTGGCATGTTCTGAAAGCATACGAATCATGTGGGAATGTACAGTTGTTGTGAACAGAATATGAAACTAAATGCTTTATTTAGGCTGATTTTCACGTGATTTTGTGTGCTAAGAACTCCATTTATGTCTTAGCTGAGGGACGTAACCTTTGATCCAGTGAAAGTGTGAAAACACATTTTGGGTGTTCTCGGTTGAATACTGCACCACGTAAGAAATACGAATATACACATGTTTAATTGGTTTGTACTTCATGACAATTTTTGGGAGGTATTCAGATGATCTTATCGGCTTCTAAGCCTGAAATGACATGGTTAGCACTTAAATTTTGCATCGCTTGCCATATATAATCGACTGTTCAAAGTTGCTAAATTTTGAATTTTAAACAAATCAGAAAGTTTTGATTTCATAATGAAATGAGCCAAGCCAACATTTTACTGACTTAGGAATGGCTTTTTAATTCCAAGAAATTGTTCAAGTACAACAGTAACATAAATTTTATTTTAAATCCTAATTATTTATAGTTTTACCGCTTTTTATATTAAGAAAAATAGGATATTTTATTTTATATTGTAAATCTAGTTTATTTTTTGATAATAAGAGTGAATAAATCCGATTTATAAAATGTAGTTATTAAATAATAGTAAAACGGAAGAATTTCTACAATTTTTACAATTTTTACAATTTCTACAAATTTTTCATTATTATAATTGTTATAGAGTTCTATTAATTATCTCCACCATTATTTTACATTTTAATATCAACATTAACAATTTCTACAATTATTTATAAAATTCCCTTATGTGCTATCATGTTATTTTACATTTAAGTCTATATATTTAAATTAATTAAGTGATTTAATACTCGAACTTTTGAAATAAATCACATTAACTAATTTTTATTATTTGGTCTAATAAGTCCTAAAAAATGGCAATTCCATGTATTGTATGCCACACATATTGACAATAATTGTAGAACTAATGTTTCATTAAAGTCTATATAACTTAAAATTTACCTAATTATATACAAAATTAACATTATTTTTCTTACATTATTCTACCATCAAGTTTGCATAATTAATTTTTGTAAAATGAGTACTTTTTAGCAAAGAAAAAAAAAGTTGGTATTTCATTATAAACGAATTTATACATTTTTATTTCTTTAATAGATAACACATAAAAAAAAAATCTTTAGAATTGGCACATCAAATGAATTCTTTATTATTAAAAAAAAATTGTTCAAAATTACATTAAATTAATGATAAGTGACGAACATTGTAGTTTGCAATTTTGAAAAATAACGTATATTTTCAGTTAATACATTTTGTGAAAATGTTAGATTTTAATTATGTATATATGTAATTTATGTTAATTAATTAATAATGATTAGAAATAATTTTTTGTATTTTATTTTGTTTTGACGCCGATGTCAATTTTTTTTGGAAAGTTTTATTATATATCAAAATTATTGCGATATGAATCAACGGTTTAAAAACTAAGTTATTATTTTAATGTAACTAAAATGCAATGTGATTATAATGTTTCTTTAATCAACATTTCTTTTAATCATTAAATAAATATTTTGTTTAACACTTTGATAATATAATAAAGGGAGATTAATTTAAAGGACAAAAATTTATATATTTTTAGCCTCAAGAACACGACCCCATTATTTTTACCACTATGACAAACATTCTCCTAAAAATTATTCATAAGGACAAACATTCCTCCAAAATTATTCATAAGGACAAAACATTCTTTCAAAACTGCTACCGAACTAAAAAATGATACCTAAAACCTGCTATCGATAATTACAAACTGATACCTAAAAACTGCTATCAATAACTAAAAACTGATACCTAAAGAAACTTGTCATTCAGGCTAAAATACTGAAGGTCTGTCCCTGAGGCTAAAATGCTGAGAATTTTTGTCATTGACAATAATTTCCTGTATAATATATAATTATTAACTCAATTATCTTAAGGATAACAACTTTCATTTATTTTCTTAACAAGCACTAAATGCTATAAAATAATAAATCATTATTTAACTCATTATTATTTACAAAAAAATAACAATTTCATTTTGTATACAAATATGAAAATAAATAAATCACATAAAAAACATATATTAAAAAATAACAAATGTAGTACATAACTCAATTATCTTAACCATTTCACCTTATATTGCATAATAGATTTAATTCTTTAAAGAAATTTATTGAAATATTTTTCTAAAACATACCATATGCAACACACAAGTTACACGCTAGTTGAATAACAAAATCAATATCACCAAAATTAATAACTTGAATCATAAATTCTTTGCCATGTCATTTAATTAAGAGCAACAACAAATATTATAACATTGTCTTTGTGCTGTGGAATTTAGCCCAAGAGATTAAGGCTTGGGAGTGGCCAAACAAGAGCATGTGTACTTGGTTAAGGCGGGAGGTCGGGAAAAAGGTGACGTGGAAGAGAGACTAAGAAAAAGCAAGGAAAGGCAAACACAGCAAGGCAAAAACAGGGGAAAAGAAGGGAGGAACTCCCTCCCCATATTTGGTAGCTCAAGTAGCAAAAGGAAATCCTGTTCAGTACTCATGGTTATCGAACAGGATTTCCTGCCTAGTACCTAAGGTACCAGATAGGATTTTCTATTTGATGGATGGAGGCTCACTAAGCCAAAGGCTAAGGAGCCTACCAGGCCAAGTACAAAGAAGCTCACCGAACCAAAAAGGGGAGTATATGAACCTGGCCAACATGATGGCCATGTACATTTCGCCGAACCGACACACCTCGGATCGGACTTCTAGCCAAACCAAACGAATCATATTATGGCATAAAATCTACATATATTTGAAAATTATCGATCACATTTATGATACTCGGGAATATTCCATCTAGACGAGGTATACACGAAAATTTCCTAACTTTTCGATTTAATTACACCATCTCTTCACCTCTATAAATATCCAAGAATTTGGCATTCATGGAAATAATTTTTAAAGCTTGGGGACTCTATGCTATAGAAAAATCAAATTGAGCTTCAAATCTCAATTTTTAGTAATAATTCATTGTATTTCTTCTTAAAACTCTTGTAAAAGCCGAAATATAAAGAAAGGAATGATTATGAACAGTGAAAGTAGGCCTATTACGGCTGAACCACGATAAATTTGCACGTGTTTTACGTTCTTCGCATTTATTTACTGTTGAATCTACTGTTGTTAATTTGATTGGAGGTGTTTGTCCATTTTTTTAAAGCAAATTTTTTTTGTGCTTTCGTGGAAAACTAAACAATTTTAACATGCCTCCTAAATCTAAGAGAAGGATCCTTGACGCCAGTAGGGGTGTCAACCGTGAGACTACGGAGCAGGACAATCATTCATCCAACAATCTGGTGCCAAACGCCATCACTAGAGATGACTTGGATAGAGTTGTGGCAGATCTTGACACTTGCTTATCTGTCCAACAACAAGCTATTGTGGATCAAATCAGGACACGCTTGGGGCAGACATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020259623.1	7.0e-224	cytochrome P450 87A3-like
Swissprot	Q7XU38.3	8.3e-190	Cytochrome P450 87A3
trEMBL	A0A5P1F5C2	1.7e-219	Cytochrome P450 87A3-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G12740.1	67.17	0.0	659	CYP87A2	cytochrome P450, family 87, subfamily A, polypeptide 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g13136	AT1G12740.1	460	149	2	10	469	8	465	67.17	0.0	659
g13136	AT1G12740.2	466	147	3	10	469	8	471	66.74	0.0	654
g13136	AT5G48000.5	453	258	4	19	469	21	471	42.16	1e-104	377

Ortholog group

Species	Genes
Allium cepa	g13136.t1
Allium fistulosum	AfisC1G02260
Allium sativum	Asa7G02212.1
Arabidopsis thaliana	AT1G12740.1; AT1G12740.2
Oryza sativa	LOC_Os02g45280.1; LOC_Os04g48170.1; LOC_Os04g48210.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	34	458	204.0	3.3e-60

Gene Ontology

Accession	Ontology	Name
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004497	F	monooxygenase activity
GO:0055114	P	oxidation-reduction process
GO:0016491	F	oxidoreductase activity
GO:0006629	P	lipid metabolic process
GO:0006694	P	steroid biosynthetic process
GO:0007275	P	multicellular organism development
GO:0008150	P	biological_process
GO:0008202	P	steroid metabolic process
GO:0008610	P	lipid biosynthetic process
GO:0009058	P	biosynthetic process
GO:0010268	P	brassinosteroid homeostasis
GO:0010817	P	regulation of hormone levels
GO:0016125	P	sterol metabolic process
GO:0016128	P	phytosteroid metabolic process
GO:0016129	P	phytosteroid biosynthetic process
GO:0016131	P	brassinosteroid metabolic process
GO:0016132	P	brassinosteroid biosynthetic process
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0042445	P	hormone metabolic process
GO:0042446	P	hormone biosynthetic process
GO:0042592	P	homeostatic process
GO:0044238	P	primary metabolic process
GO:0048856	P	anatomical structure development
GO:0048878	P	chemical homeostasis
GO:0055088	P	lipid homeostasis
GO:0065007	P	biological regulation
GO:0065008	P	regulation of biological quality
GO:0071704	P	organic substance metabolic process
GO:1901360	P	organic cyclic compound metabolic process
GO:1901362	P	organic cyclic compound biosynthetic process
GO:1901576	P	organic substance biosynthetic process
GO:1901615	P	organic hydroxy compound metabolic process
GO:1901617	P	organic hydroxy compound biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K07437	CYP26A; cytochrome P450 family 26 subfamily A	EC:-	Retinol metabolism	ko00830

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network