Detail information of g133321


Location
GeneChrStartEndStrand
g133321Scaffold_42192:HRSCAF_425278745034746612-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPON75758.11.2e-51hypothetical protein PanWU01x14_040180
SwissprotQ94CK9.13.2e-30Protein LATERAL ROOT PRIMORDIUM 1
trEMBLA0A2P5DR488.3e-52Protein LATERAL ROOT PRIMORDIUM 1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G12330.456.458e-49 190LRP1Lateral root primordium (LRP) protein-related

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag133321.t1; g251703.t1
Allium fistulosumAfisC2G04335; AfisC5G02803
Allium sativumAsa4G04365.1; Asa6G01976.1; Asa6G01977.1
Arabidopsis thalianaAT3G54430.1
Oryza sativaLOC_Os01g72490.1; LOC_Os01g72490.2; LOC_Os05g32070.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF05142.9DUF702Family28182193.42.4e-57

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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