Detail information of g135861


Location
GeneChrStartEndStrand
g135861CHR72008308220099618+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020252422.11.1e-94LIM domain-containing protein WLIM2b-like
SwissprotQ9M047.12.0e-85Widely-expressed LIM protein 2B
trEMBLA0A5P1FEP77.7e-95LIM domain-containing protein WLIM2b-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G55770.178.143e-83 305WLIM2bGATA type zinc finger transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00412.19LIMDomain11116539.54.3e-10
PF00412.19LIMDomain21026541.88.4e-11

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003674Fmolecular_function
GO:0003779Factin binding
GO:0051015Factin filament binding
GO:0051017Pactin filament bundle assembly
GO:0030036Pactin cytoskeleton organization
GO:0007010Pcytoskeleton organization
GO:0005488Fbinding
GO:0006996Porganelle organization
GO:0007015Pactin filament organization
GO:0008092Fcytoskeletal protein binding
GO:0008150Pbiological_process
GO:0009987Pcellular process
GO:0022607Pcellular component assembly
GO:0016043Pcellular component organization
GO:0030029Pactin filament-based process
GO:0044085Pcellular component biogenesis
GO:0044877Fmacromolecular complex binding
GO:0061572Pactin filament bundle organization
GO:0071840Pcellular component organization or biogenesis
GO:0097435Pfibril organization

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09377CSRP; cysteine and glycine-rich proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.