result

Gene information

Detail information of g136027

Location

Gene	Chr	Start	End	Strand
g136027	Scaffold_42488:HRSCAF_425574	394259	396443	+

Sequences

CDS

Protein

Gene

>g136027.t1
ATGGCGATGGAGATCATATTAGTGTCTACATTGATCATATCGCTACTAATATTTCTTGGATTTAGAAGCAATGGGAAAACGGAGAGAAAATTGCTGCCTACACTACCACCAGGCAATCTTGGAGGTTGGCCATTCATCGGTGACACCATTCCGTTCATGACACCTCATTCTTCTGCTTTGTTGGGCACTTACATCGATCAAAATATTTCCAAGTAAGTATTCAAAATAACTCATTATATTACTTTGTTTATTGAAGCTTAATATATGTACTGAGCTTTGTTAATGTTTGTACAAGATATGGGAGGATATTTCGAATGAACTTGTTAGGAAAGGCAACGATCGTGTCTGTAGACCCTGATTTCAACAGATATATTCTACAGAATGAAGGAAGATTGTTTGAAAATAGCTGCCCAACGAGCATTAAAGAGATTTTGGGAAAATGGTCTATGCTTGCATTAGCTGGGGATATACACAGAGAAATGAGATCCATTGCTGTGAATTTCATGAACAGTGTTAAGCTTAGAACTTATTTTTTAAAGGATATTGATATTCAGGCTGTTAATATTCTTGATGCTTGGAAGGTCAACTCTACTTTCTCTGCACAGGATGAAGGAAAGAAGGTACCTCATTTGTATATATGCTTCATATAGATGTTTTTCTTAAGATACAAAAAGAGAAAAAATTTGAAGTTGCAGGTTTATAATTTTATGTCCATGAACTGTTAGCAAATCTTGTTACTTCCTCTTTATGAATTTTGATTCGATGTAAAAGTTATCATAATTTTATTGCTCTTCTTTGCAAGTGAATGCAGTTTGCATTTAACCTCATGGTGAAGCATCTAATGAATATGGATCCTGGAATGCCAGAGACAGAAGAAATCAGAAAAGAGTACATTTTCTTCATGGAGGGGATGGCTTCCATTCCTTTAAACTTTCCTGGAACAGCCTACAGAAGAGCTTTACAGGTATATATATTATAACGCATTTAATATATATACTATTGAACTCGATCACTTCAAATAATAAAATAAAAACTTAAATAAATATATGTAAATAAGTGCATACACCATGTTTCTTCCAGTCAAGGTCCAGGATTCTGGCAATAATGGGGCAAAAGCTTGACGAAAGGATGCAGAAAATAAAAGAAGGCTGTAAAGGACTGGAAGAAGAGGATCTTCTTGCCTCAGTTGCAAGAAATACTAACATAACAAGAGACCAGATTCTTGATTTGATGATCAGCATGCTTTTTGCTGGTCATGAAACTTCTTCTGCCGCTATTTCTCTTGCCATTTATTTCCTGCAAGCTTCCCCCGATGTTCTTAAAAAGCTTCGAGTATGCTTTCCCATCGAATTTTTACGCTATTAATATGTTATTTGTGACTGGTAATTTAGTTTGCTAATGAAATTATGTAGGAGGAGCACATAAAGATTGCAAAACAAAAGAAAGAAAGGGGCGAAACTGAATTGAACTGGGATGATTACAAGCAAATGGAATTCACAAACTGCGTAAGCTAGCTAGCTTTCATATATTTAAAACATATATATAAAAGATTATGCCATAAAAAATGACCGTAATCGGTATATATATTGTGTAGGTTATTCATGAAACCCTAAGATTAGGCAACATCGTTAAGTTTTTGCATCGGAAAACCATCAAAGATGTTCAATACAAAGGTAAATTCAGTAGCTTGTTTATGTTGTTTATTTATAGCAGTGTCAAAAACATAAGGTTTGAAATGCTATTTTTACAGGTTATGAAATTCCATGTGGTTGGGAAGTAGTGCCAATCATCTCAGCAGCACATTTGGATTCTTCTATCTTTGACAACCCACAAAGTTATGATCCTTCGAGGTGGGAGGTAAGTTATAAGTGCTTATTTGCTATATGCTTTTTCTATCATTGACGAACATATGTATGTATACACTCTTATGCTTAGTGTTAAAAACATAAAATGCATTGTGTAGGCGATATTTTCAGCCGGAGCAAAGAGCAATATAATGTCATTCAGCGGTGGACCTCGGTTATGTCCAGGAGCAGAGTTGGCGAAACTGGAGATGGCTATTTTTCTTCATCATCTTGTACAGAGGTTCGACTGGGAATTGGTGGAGAAGGATAACCCTGTATCATTCCCCTTCCTTGGATTTCCCAAGAAATTGCCTATCAAAATCACAGCTCTTAAACATTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256267.1	6.4e-222	cytochrome P450 90B1-like
Swissprot	O64989.2	2.1e-153	Steroid 22-alpha-hydroxylase
trEMBL	A0A8B7C2L1	2.1e-206	cytochrome P450 90B1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G50660.1	53.72	2e-158	555	AtDWF4;CLM;CYP90B1;DWF4;PSC1;SAV1;SNP2	Cytochrome P450 superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g136027	AT3G50660.1	484	192	3	26	478	30	512	53.72	2e-158	555
g136027	AT5G05690.1	441	258	7	35	473	31	463	39.23	1e-90	330
g136027	AT4G36380.1	448	277	6	35	478	69	512	36.38	7e-83	305

Ortholog group

Species	Genes
Allium cepa	g136027.t1
Allium fistulosum	AfisC3G01610
Allium sativum	Asa2G00166.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	37	461	214.9	1.6e-63

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09587	CYP90B1, DWF4; steroid 22-alpha-hydroxylase	EC:1.14.13.-	Brassinosteroid biosynthesis	ko00905
K09588	CYP90A1, CPD; cytochrome P450 family 90 subfamily A polypeptide 1	EC:1.14.-.-	Brassinosteroid biosynthesis	ko00905
K09590	CYP85A1, BR6OX1; brassinosteroid-6-oxidase 1	EC:1.14.-.-	Brassinosteroid biosynthesis	ko00905

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network