result

Gene information

Detail information of g136954

Location

Gene	Chr	Start	End	Strand
g136954	CHR2	35274257	35275969	-

Sequences

CDS

>g136954.t1
ATGAAGGTCCGCTACTTAACATCGGTCTCAAATGATCCCAAAATTAACAAATTTCCTACCAGTCAGGCGGTGTTTGCAATTGTAATCGGAGTTTCAGGGCTTATTTTCTCTTTCATGTTGTATTTCTGCATCAGAAGGACATGCAGGAAAAAACATACGGATAAGTTCTTCATAAAAGAGGTAAGTTTGAGAAGATTCAGCTTCAGCGAAATAGAAAAGGCCACCAAATGCTTCAGCAAAGAAAGCATGATTGGGTCAGGTGCATTTGGAAGTGTTTATAAGGGAATTTTGGATGGTGAAGTTCTTGCAATCAAGAGAGAGCATGTAGATTCATACGAGAATCGTAAGGAGTTCAAAAATGAGGTGGAGCTTCTGTGGAGAGTGAAGCATCTGAATCTTGTGGCTCTGGTTGGATTTTGCCAGGAGGCGGATCATAGGATACTGGTTTATGAGTACATTCCACATGGAACACTTCTAGAGTATATGGTTGGTAATAAGAGGAAAATTTTAACCTGGCAGCAACGGGTAAATATAGCTATTGGAGCTGCCAAAGGCATAGCTCATCTACATGAAAGTGTGGATCCAAGCATAATCCACAGAGATATTAAACCTAGTAACATTCTGATTGGGGAAGGGTTTGAAGCTAAAGTGTCGGATTTTGGGTTAGTGAGGTCAGGACCCACAGGCGAAGAATCGCACGTAAGCAGTCAAGTAAAAGGAACTCCTGGCTACATGGACCCTGCTTATTGTTCTAGCTACCATTTGTCCACTTTTAGCGATGTCTATAGTTACGGAGTCATTCTTCTCCAGCTCATCTCCTCCAGGCCAGCCATTGATGCCAATAGACCAAAGCGGTACCACCATATCATTGATTGGGCAAGGTCAAGTTTGGAAAATGGCATAGTGCAAGAAATACTTGACGCTAACTTACTATTAGAAGCATGCAACATGGGTATGATGCTAAAGATGGGGAGATTAGCCCTAAAATGTGTGGCGGAGAATCCTAAGAATAGGCCTACGATGCTCCAAGTTGTTCAAGAATTGGAAGATGCAATGAAGTACTACGCAATTCCCACAGCAAACAAGATAACGAAATCAATGGCACTAGATGAATCTATGAGCTTTAGCGTATCAGGAGTTGGACTAGAGAAATTCCATATTGAGACGGACGATATTTCAATACATAGTGTGGCAATGAAGTGCATTGATATAACTGATATTGACTACAGTCATAGTATTGATGTTGCTCATTTGAAGAACAGTTGGTAG

Protein

Gene

>g136954.t1
ATGAAGGTCCGCTACTTAACATCGGTCTCAAATGATCCCAAAATTAACAAATTTCCTACCAGTCAGGCGGTGTTTGCAATTGTAATCGGAGTTTCAGGGCTTATTTTCTCTTTCATGTTGTATTTCTGCATCAGAAGGACATGCAGGAAAAAACATACGGATAAGTTCTTCATAAAAGGTGATAGTTCAGTAAATTATTTACATTTTTAAAAAACGTCAAAAGCCATTGATTTGAATTGTTTTGATTTCCACAGAGGTAAGTTTGAGAAGATTCAGCTTCAGCGAAATAGAAAAGGCCACCAAATGCTTCAGCAAAGAAAGCATGATTGGGTCAGGTGCATTTGGAAGTGTTTATAAGGGAATTTTGGATGGTGAAGTTCTTGCAATCAAGAGAGAGCATGTAGATTCATACGAGAATCGTAAGGAGTTCAAAAATGGTATAATCATTTTTATCAATATTTAAAACTAACTTTAGTAAGGAAAAAAAAAACATGTGTATGAAGTTATAGAAGCAAGTTTTTGATGCAGAGGTGGAGCTTCTGTGGAGAGTGAAGCATCTGAATCTTGTGGCTCTGGTTGGATTTTGCCAGGAGGCGGGTATAAATAATACATACCTCTATCCATTTACATTACTACCATACCCTAAACTTTGTTCTAGCATTCGCTAAATTTGACACTGCAGATCATAGGATACTGGTTTATGAGTACATTCCACATGGAACACTTCTAGAGTATATGGTTGGTAATAAGAGGAAAATTTTAACCTGGCAGCAACGGGTAAATATAGCTATTGGAGCTGCCAAAGGTAAATCATACAATATCAATAGCCGTTGAACTTAAATAAGTCGCAAGTTAGTTGTACTATAGAGGCGGGCTCGTTAATTACTAATGGTGCAGGCATAGCTCATCTACATGAAAGTGTGGATCCAAGCATAATCCACAGAGATATTAAACCTAGTAACATTCTGATTGGGGAAGGGTTTGAAGCTAAAGTGTCGGATTTTGGGTTAGTGAGGTCAGGACCCACAGGCGAAGAATCGCACGTAAGCAGTCAAGTAAAAGGAACTCCTGGCTACATGGACCCTGCTTATTGTTCTAGCTACCATTTGTCCACTTTTAGCGATGTCTATAGTTACGGAGTCATTCTTCTCCAGCTCATCTCCTCCAGGCCAGCCATTGATGCCAATAGACCAAAGCGGTACCACCATATCATTGATTGGGTATGTTTGAAACTTATATGGTTTCAGCAGTATGAATAAACATCACAACTATATATAATTCTCATATAAAAAGAAAATTATATTAAATCTTTTTCTTAAGGCAAGGTCAAGTTTGGAAAATGGCATAGTGCAAGAAATACTTGACGCTAACTTACTATTAGAAGCATGCAACATGGGTATGATGCTAAAGATGGGGAGATTAGCCCTAAAATGTGTGGCGGAGAATCCTAAGAATAGGCCTACGATGCTCCAAGTTGTTCAAGAATTGGAAGATGCAATGAAGTACTACGCAATTCCCACAGCAAACAAGATAACGAAATCAATGGCACTAGATGAATCTATGAGCTTTAGCGTATCAGGAGTTGGACTAGAGAAATTCCATATTGAGACGGACGATATTTCAATACATAGTGTGGCAATGAAGTGCATTGATATAACTGATATTGACTACAGTCATAGTATTGATGTTGCTCATTTGAAGAACAGTTGGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020262964.1	4.6e-147	probable LRR receptor-like serine/threonine-protein kinase At1g53440
Swissprot	O64556.3	8.6e-66	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230
trEMBL	A0A5P1F848	2.1e-141	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G19230.1	40.41	9e-69	257		Leucine-rich repeat transmembrane protein kinase protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g136954	AT2G19230.1	344	202	2	9	352	503	843	40.41	9e-69	257
g136954	AT1G51880.1	333	181	6	24	352	522	846	42.04	7e-68	254
g136954	AT5G02290.2	313	169	5	52	350	42	352	40.89	5e-67	251

Ortholog group

Species	Genes
Allium cepa	g136954.t1
Allium fistulosum	AfisC2G08847
Allium sativum	Asa6G00665.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	79	346	153.2	7.6e-45

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0002376	P	immune system process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0006952	P	defense response
GO:0050832	P	defense response to fungus
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0005623	C	cell
GO:0005911	C	cell-cell junction
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0006950	P	response to stress
GO:0006955	P	immune response
GO:0008150	P	biological_process
GO:0009506	C	plasmodesma
GO:0009605	P	response to external stimulus
GO:0009607	P	response to biotic stimulus
GO:0051707	P	response to other organism
GO:0009620	P	response to fungus
GO:0009814	P	defense response, incompatible interaction
GO:0009817	P	defense response to fungus, incompatible interaction
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0030054	C	cell junction
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043207	P	response to external biotic stimulus
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0045087	P	innate immune response
GO:0046777	P	protein autophosphorylation
GO:0050896	P	response to stimulus
GO:0051704	P	multi-organism process
GO:0055044	C	symplast
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:0098542	P	defense response to other organism
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network