result

Gene information

Detail information of g140829

Location

Gene	Chr	Start	End	Strand
g140829	Scaffold_43041:HRSCAF_426127	139445	140143	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020271844.1	3.5e-48	basic leucine zipper 23-like isoform X1
Swissprot	Q8VY76.1	4.3e-19	Basic leucine zipper 19
trEMBL	A0A5P1EH23	2.5e-48	BZIP domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G16770.1	46.64	1e-51	199	bZIP23	Basic-leucine zipper (bZIP) transcription factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g140829	AT2G16770.1	238	95	7	1	219	1	225	46.64	1e-51	199
g140829	AT4G35040.1	241	77	8	1	204	1	228	47.30	7e-51	196
g140829	AT3G51960.2	185	107	2	4	184	26	209	39.46	2e-32	135

Ortholog group

Species	Genes
Allium cepa	g140829.t1; g325045.t1
Allium fistulosum	AfisC1G02492; AfisC5G06941
Allium sativum	Asa3G03771.1; Asa4G00874.1; Asa4G00875.1; Asa4G04645.1; Asa5G04420.1; Asa7G02467.1; Asa7G05774.1
Arabidopsis thaliana	AT2G16770.1; AT4G35040.1
Oryza sativa	LOC_Os06g50310.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07716.12	bZIP_2	Family	69	125	42.0	6.7e-11

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0003674	F	molecular_function
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005488	F	binding
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008150	P	biological_process
GO:0010038	P	response to metal ion
GO:0009889	P	regulation of biosynthetic process
GO:0010035	P	response to inorganic substance
GO:0010043	P	response to zinc ion
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0042221	P	response to chemical
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043565	F	sequence-specific DNA binding
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:0097159	F	organic cyclic compound binding
GO:1901363	F	heterocyclic compound binding
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network