result

Gene information

Detail information of g141409

Location

Gene	Chr	Start	End	Strand
g141409	CHR6	302135555	302144734	-

Sequences

CDS

Protein

Gene

>g141409.t1
ATGATGGTCAGTTCATGTAAAGATGGAAAAGGAGGAATAGATAATGGGAAATATGTTAGATATACTCCTGAGCAAGTAGAAGCTTTAGAAAGGTTGTATCATGAATGCCCGAAACCGAGTTCAATCCGTAGGCAGCAGTTGATTAGAGAATGTCCTATACTTTCAGATATTGAACCAAAGCAGATTAAAGTTTGGTTCCAAAATAGAAGGTATGCTTCTATTACACGATCATTTGCATTATTTCTTGTTTTGTTGTTGTATGTTTGCTTAAATTTGCATGTTTATTTTCATGAGTGTAGATGTAGGGAGAAACAAAGGAAGGAATCTTCGAGATTGCAGGCGGTTAACAGGAAGCTTTCTGCTATGAATAAGCTTTTGATGGAAGAGAATGATAGATTGCAGAAGCAAGTGTCACAATTGGTTTATGACAATGGATATTTTCGGCATCAAACACAAAACGTATTCTTTCATCATTTTTTATTTATTAATGTTTTATAAGAGAAGGCCGAGAAGCAAAAAATAACACTTGCCTTGAACCAAGCACGTTGGCTAAAAAACTGTCAAATTTCCAAATACATATCAGTTCAGCATTTCCCTTTCAGATGAGGAACCTAAACCAGTAATGTATTTTAAAAACAAATTCGACAGAACTCAAAAAGGAAAATGGAGCTACTATGCTACTTAAATCTGTCTTCTATTTGTGCATCATTTGTAATTTATTTTTTTATTTTTTTATTTTTTTTTTATTTTAAGGTTGCATTAGCTACTACAGACACGAGCTGTGAGTCAGTAGTGACGAGTGGTCAGCACAATTTGCCACCTCAGCATCCTCCAAGGGATGCTAGCCCTGCTGGGTAAGAACCACATTATTAATGCCTCTCTTCTTCATATATTTTGTTCTAAATTTTTGAGTTTGTTATGTTCGCATGACCGGTGAAGTTGATTCATTTGTGTGTATGTGTATAGACTGATGTCCATAGCCGAAGAAACTTTATCAGAGTTTCTATCAAAGGCAACTGGAACTGCTGTGGAGTGGGTCCAAATGCCTGGGATGAAGGTTTAACTTTCAATATATGTCTATATAATCATAATTAAATATGTTGGTGAAAACATATAATAATCATTTGGATGTGTTGCAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATCTCACATGGTTGCACGGGTGTGGCAGCACGTGCTTGTGGCCTTGTTAGTTTAGAACCCACAAGGGTAATTTACAATGATACTTGAACTGCAAAATATTAATCATGCGGCAACTAATCAATAGGTTGTTCTGATGGTTGATACAAATTTTGAATTTTGCTTGGCAGATTTCCGAAATTTTGAAAGATCGTACATCATGGTTTCGTGACTGTCGATCTGTAGATGTCATAAATGTGTTGCCTGCTGGAAGTAATGGAACCATTGAGCTTCTCTACGTGCAGGTAAAATACCAATATCCCTTGATATATATGGATTTGTTTAGTGTATATCCTTGTGTTTTATTTTGGTCCTTGCTAATCAGAGTATGTAATTTACAATAATGCACTTCAAAAATTAAAAAGGATTATTTTCTCCGAGTGAGGACTTCTGTAGATAAAATAGCTATATCTATATGAAAGGTATCAAAAATTTGGAGTGCTTCTTTAAAGATGACGACTTTGTGTTTAAAGGATGTTGTAATGAATCAAATGGAGATATTTCAACAAAACTGATGATGGTGTAGAATTTTTATCTAGTTAATGCATCGATACAATTCATTGCTTTTCAGCTTTATGCTCCTACTACGTTGGCACCTGCTCGAGATTTCTGGTTGCTTCGATATACATCGGTTCTGGATGATGGCAGTCTAGTGGTATGCTATGAGAACAAATAATATATGAAATATATTACCATCTCTTTATCGGATGTTGGTGTACCTCATATCATAGGTTATGAATTTGTTAGGTTTGTGAAAGATCGCTTAACAGCACACAAGGTGGTCCAAGCATGCCTTCTGTGCAACCTTTTGTCAGAGCAGAAATGCTTCCAAGTGGTTACTTGATAAGGCCATGTGATGGCGGAGGGTCTATAATTCACATTGTTGATCATATGGACTTGGAGGTATAATCCAATTTAATAAATATTAATATAGCTAAATGTCTTTATCTATAAAGAATTATTATTCTCCGTCAACAAGATACTCTCAGACCCCACAATTTCTCGAGTTCTTTCATTCCAAGTATATTAAAGTGGAGTGTTGAAGTATTTTTGAAGTGAAAATAACATTTCCACCCTTAAATGTTTTCGCCACCCGGGACTTTGAATTTTTACTGACATATCTCTGAATGACAATATAGCCCTTACTTTCGGACCATCATGATTACTATTTGCTTTGGAATACAGAGTTTAAAATTGAAGCTAACTTCCGGTCACTGTTGTTTTGATGTGGATAAAGTATTCTAGCCGTGGAAGGATTTGTACTTAGAGTGCCTTACTGTAATGAATGTTAGGTTTTGTGTGCACTAACATATTTTGCTGTCAAAGCAGCCATGTAGTGTGCCTGAAGTTTTACGTCCACTTTATAAATCTTCTACCATGCTTGCTCAAAAGACAACAATGGCGGTAAGCGCAACTGCTATGTACTGTTGTGCCCTCATGTATCTGTGCTATTGAACATGTTCTCACTCAGTCCCGTTGTGTTTCTTCAAAATAGGCTCTACGGCATCTAAGGCAAATATCACATGAATTATCTCATTCTAATATCACTGGATGGGGACGAAGACCTGCAGCTTTGAGAGCACTTAGCCAGAGATTGAGCAGGTTTTTTAAATAAACAACCTCGTATTTTGCTATATGTGTTTTTTTTCCCTTGCGTTTTTCAGATTTAAAATTCTGTTAAGTAATAACATATAAACCATGTAGGGGATTCAATGAAGGTGTAAATGGCTTTGCTGATGAAGGATGGTCTCTGATCAACAATGATGGAGTTGACGATGTTTCCATTCTCGTTAACTCTTCACCGAATAAAATGATGAGCTTGAATCTTGGTTTTTTGAATGGCTTTCCTTCGACTGTCACTTCTGTGCTGTGTGCCAAGGCATCCATGCTTTTGCAGGTAAGCATAATAGCAGTAAATTTTTAGTGGAAATGTTAACCTGTATAGGATGATTATTTTATCTTTATGATTTTTTATGGTAAGGGTAAATTTGGATTCGGGTGGAAAATATATTTTGTAAAGCTTTGTGCATGTACAATATTTAATAGAATAAAGCCAGTTACCAAGTTAAACAAAGGTCAACTTTGATACCAATGGAAATACTCTGTTATACCAAGCTATCTCAATAAAGAGCGTGTGTTTTTGGTGCCTATAATTGTTAGCTTATTGTGTGTGTGTGTGTGTGTCTTCTTGAATATTAATCTATACCGATTCTTTATATGTTTCATTTATTTTAGAATGTATATCCTACAATGCTTTTAAAGTTTTTACGAGAGCACCGATCAGAATGGGCAGACAGCAGTATAGATGCGTATTCTGCTGCATCTGTCAAAACCAGTCCTTGCACCTTACCTGGGACCCATATATCTGGTTTTGGTGGTCAGGTTATACTTCCATTAGCACATACACTTGAGAATGAAGAAGTAAGCAGTTTGATTGAAGTAGTTACAATCATCATTCCAATTTTTTTCCCAGTAACATGTTAGTATTTACTCTTTACATTTTTTGACAGTTTTTGGAGGTTATTAAACTGGAGAACATAACTCACTTTCAAGATGTCATTGTGCCTCGGGATCTTTTTCTCTTGCAAGTAAGTATTCAAGCACATTAACCAAAAAAATAAAAATAAGAAGAAGTTCAATGCGCATTTTAAATGATTCATGTAGTACAGTGCATTGTTTTTTTTTTAGCATTATGCTGTATATCAATGTATACAGGGGATCTTTTTATGTCAACGTTGCTTGTAAAAATGTAAGCTTCTTCCAACATGTACTTGTAACTTGATTATTAGAATATAAACTCCTCTGCTTCTTAGTTCTGCTTGCATATTAATCTTTTGTTTTGATATCAAATTGAATTGGGAGGTTTAAATAATGCACTTTCAACTTTCAACTTCTTTCAGTTCTGCAGTGGTGTGAATGAGAATGCAGTTGGTAGTTGTGCAGAGCTTATATTTGCTCCAATTGATGCATCTTTTGCTGATGATGCCCCTTTATTGCCTTCAGGCTTCCGGATAATGCCCTTTGACTCTTTGAGTGTAAGTACTTTGATACCAGTATTAAAATAGGGCATCTGTACTATAAAACATAATTGATAACCGTAAGTTTGTTTTAAGAATTATGTGCACTCAGTTTTGCAAGCAATAATGTTCTACGTAAAAAATGGAGCCAATACCGTGATAAAAAAAAAGTTTCCGAATCTCTCCAATTTAAATATTGTAAACTTATTCGATTTACATTCCAACTCGAACTCAGTTAAAATCACAATTGATAAAAATCATTCAGTCCATACTGATATATCATACTTGAATCCACAATACCAATTTTAACGTTTTCTAAACAAAATAAAAATAGAACAAGCGAGAAAGTTGAGCTTTTAGTTTAAGATGTAAAAGTTCAAATTTCAAAATCAATTTCAAAGCGTGTACAAACCTCAACATATGGATCTTGTAGATCTACGATTTACGATCTGAATCCCGTTGTGATAAAATGTTTGAACTTTCCGATTTGAATCTCATTGTTGAAACCTTGTCGTAAATACAGTATTTTAACAAGTTTGCAAAACAGATATGCATCTGAAAACCAGCACAAATTAGAGATATGTTGGGTAACACGCTCTGCATCTGAAATATGCAGTGATATAGAAATTTTTAATGCAGGAAAACTCAAGTCCAAATCGAACTCTTGATCTAGCATCTTCTCTTGAAGTTGGATCAGTAAAAGGTAGAGTTGGTGGCGATTTGAACAAAAATTATGGAAGCACAAAATCCGTGTTGACAATAGCATTCCAATTTGCTTTTGAGAATCATCTTCAAGAAAACGTGGCAATCATGGCAAGGCAATATGTCCGTAATATAATATCATCTGTCCAAAGAGTTGCATTAGCACTATCACCTCCTCGTATTAGCTGCAACAGTGGAGTCCATGCAAGTCCTGAGGCAGCTATGCTTGCAAGCTGGATTTGTCATAGCTACAAGTATGATAACATTTAAAGATCATAATATTACAGTCTTGTTGAATGAAAATACATCTTATGGCAGTCATTTGTTCCTCATTTTTACAGGAGCAAATCCGGGGTGAACCTCCTTAAAACTGTGATGGAAGGTAGTGATTCGGTTGTCAAATCACTTTGGCAGCATGCAGATGCTATTGTTTGCTGTTCCTTAAAGGTTTGAACTCGCATTTTTTGCTTTTATAACGACTACACATGGACCTTATCGTATTATTCTTCTGTTCGTGACACTCGAGTTACTTATTTAAAATTGTTGAGTAATCCTTTAGGAAGAGGGTGCTGAGAGCATATAAGATAGAGAAGCAATTATATTACTACCAAAAATTTCATCTTTCTTACCCTTGCACTCTTACTACCATTGCTCTTCGTCATCCATTATTACTGCTCACTTCTTCACTTGAGCTTGGTTACTTTGTTGCTTGAATGGTTCGAAATAAAAGAGTGAAACTCTATTCATAGTGTCCTCACTTTGAGAAAGATCTAGATACGGATAAATCTTGAAGAATGTCGTCAAGTTTTACCTTTAGCCTTTCTAGGTTAGGAGAACATTAGAACATCTGGATATTTTTTTTTATATAGTTTTGAATAGGTAAGAGGGATAGTGATTTTATATTTTTCATGCACTCCGTCAACAACTACTCTCTCTTAGTTGCTACAGTCATCCAGCCGACCTTTCTCAAGTTGGAGCTATATTACCGGTATACGAATCGATATGCTATGTGTTGCGAAAAGGAGGGCGTAAATGTTACACACCATATATAACACAGTATATTATGAGTGTTTGATCAGGGCGGTCGGTCGAAACGAAACGTCTAGCCGCTCTGATTAAACCTACTCCTAATATATTGTGTTAAACAGTATGTAACATTTTCGATCACATCTCAAGGATTTCATACACAATATCTCGTGTCCGGTGTTATTTTGGATGATATAAGTGTATATCGGATGTACATCTCAGATTGACATCTCATATCTTAAAATGCATCTTGGGAATCTGTGTAATTTATCAGATTAAATTTATTTATTTATTAAAATATTTTTTAATGTTTGCTATTAAAAGAAAGAGGTGGAGCTTTGGTGTAAGGGTAAGCTCACCTGACTGGTGATCTGAGCGTCAAGGGTTCGAGTCCGGAAACAACCACTTCGCAAAGCGAGGGAAAGACTGCGTACAATCGACCTCCCTATAGTCCGTTATCGCGCGGGAGCCTCGTGCACTTGGTTCCACCTTGCTACTAAAGAAAAATTATAACACACTTAATTTGCATAGAAAGATAGTCATTGCAGTAGAATGAGAATATTGATTTTTTTTAGGAGCGGAGTAACTTGATTAGTTTGGTAGCAAATGAAGAATTTTTTTCTCCATTTAAAAATTAATAAAAGAAAAATAATCGTTTGTTGTGACTCGCCTGTATAAAAAGCAAAACAGTAGGATTAAAGGGATTATTAAATAATAATTGGTAGCATATTCTATTTGGACCATATAAAAAGTAAAATTAATAATGAAAAACATATAATTTCAGAAGATATCTCGGTCCCGATCCAAACTTCTGTTGATATTTTAATATATTGGAAGAAATGAGTGCCAATATGAACGAGATTTGATGTTTCAGCTCGTTCGAACGCAAAAAGAAGATATCAAGCGAGATATAAGACTTTGATTTGTACCGATAGATATAAAATGATGGAAATAATTTAATTTTCCCAGCTATTTTTTTTTATTTGGTGCATCTCCTTTTCCTCGTCTCTAGTTACATGGATGGTTGTTTTGATCCATGTAGCATAACATTGTATTCTTGTAGTACAACGGCTGCTTTATATATACAAGAAAAGAGTCATAGGTTTCTGTTTTTGATGTTATAAGAAAAGTCTATGTAGATATGAATATGTAAATTTTGGTCCGTATTTTTTAAAAACAGATAAAGCAAGATGCCTTGCACTTTTCTGACAGAAAATGCAAGCTATCGTGCAATTTTTTGACTTTGAATTTATTTTCTTTAGAAAATTTTGAAAAGCTTCTATTAGTAAAGCGCAAGCTAGTTTGCGCTTTCCAATTTTGAATTTTTTTTAAATGTTAGAAATTAATGAAAATTTTGAAAAATGCTCGCAAGCTAGTCTGCACTTTTTGATTTCGAATTTTTTTTTCAAAATTTTTGAAAAGCGCAAGTTAACTTGCACTTTTTATTAGGTAACCGCAAGCTAGTTTGCTTTTTTGATTTAATTTAATTTTTTGAAAATTTTGAAAATTTCGAAATTTTTTAAATTTTTTGAGCGCTAGTTAACTTGCATTTTCTATAAGAAAAGCGCAAGCTAGTTTGCGCTTTCTGATTTAGAAAAAACAGAGGCCTAATTTACGTACTCGTTACCACATGTACTTTTCTTATAACAACATCAAAAATAGGGATATTCTGTGTAAAGCCCCTAATACATAATTGTGTTCTCCTTTGGTGAATTCATTTTATTTGGTGCTTCCTTTTACATTAATCTTAATCTTGTCCTCTGCATCTTTAATGCAGAATGGATACCGTGTTGTTTTCTTTGCATAATTTTAATTAAAGTTTAGTGAAAATGCACAGTTCGATATGCCAAATTTGACAAAACTAATTTTTTTTGTTGAAAATTTTGAAATATATAGTAGCCAATCTAATTCGCTACTGTCCAATACTAATTGGATCGGATCAAATTGGATTCAAAGGTTGAATGGATCAGATGCACATTTGAAATTTAGGATCCACTTTTAAATTATATCAAATTATTGTGCAGTTAAAGCGCTTAGCGGTTCCATAACGGTGGAGGTGCAAAAAATTATGACGTAGATAAAGCAATGATATAGCAAAAAATAGCGGAAGTGCAAAAAGCTTCATCAAATATAAATCCAAATATCTAATGTTAATGTATTTTCATTCTTACATTATTTATGTAGTAATATATAACAATATCGAAATATCATGATTTATGCAATCCATATTTGATGACTACAATAGATTTATAACTTATATTGAATACTTATGACTTAAAATCAGGTCTTTAACCTAACTTTGTTGATTTGGTAAAAAGAAAACCAATCAAATTGATCTTTTTATATTAGTGTTGCTAAAACAGGTGTTAAAAAACCTTTGATTTAGTGGGTGCAGTAGAAAATAGCAGGGCTTAAAACAGATCTTCCGTTTAATAGCGCTATATTGAGAAATGTAGCAGTCGAAGGGAGCTATGCACCGTAGCGGAGATTTTGTGGGGCTTTAGCATAGCTTTAACTGCACAACTAAATTAGACATTTTGTTTTTTCTAGATTAAATTAACTCTAGAATATTTAGAAAATATTTTTCTCATACTCTAGAACTATGTCATGGTAAACATCCTTAAACTTATTTAGGCGACGCTTAAAGGTAAATTGATTGTTAAGTACTTATTTTCATAAAAAATAAATCAAAAATCATATACTAAAAAGCTCTTAGAGTGCTTAAACAACAGTTAATAGCGGTTCTCCCTATTTTTAAGCGAAATCAACGGTTTCAAGTCAAAAGTTAACGTATGCATTACCTTTAGTTTATAGATTTGCAAACTTCAATATAACGAAAGTGTAAGAATTCTATTTGTGGGTTACTTGTGATTTATAGAATTATCATAACTAGTTTGTATTATAGTATGTAAAATAAATTTTAGTCCTAAAAATGCTAATACTTAAGCCATAGTTTTCAAAAGCTCAGACTGATATTACAAAGCACAATTTCCCTGAGCATCATTAAGTGCCTTGCTTTGTTTCACGTAGCTATGGAATAGATGGAATATATACACATACATATATACATGTATATGTATGTATGTATGTAGAGAGGGGGGAGGGGGGGGGGGAGGGGGAGGGGAGGGTGTGTGTGTATGTGAGCTGCATTTCTTTTCTAATTAACACGGATCTTTGTCCATGATTTGCAGGCAATGCCGAGTTTCACCTTCGCACCAAGCAGGGACTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020269197.1	0.0e+00	homeobox-leucine zipper protein ATHB-15-like isoform X2
Swissprot	Q9ZU11.1	0.0e+00	Protein INCURVATA 4
trEMBL	A0A6I9QUM6	0.0e+00	homeobox-leucine zipper protein ATHB-15 isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G52150.3	75.07	0.0	1168	ATHB-15;ATHB15;CNA;ICU4	Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
g141409	AT1G52150.3	750	176	6	2	744	1	746	75.07	1168
g141409	AT1G52150.1	750	176	6	2	744	1	746	75.07	1165
g141409	AT1G52150.2	751	176	7	2	744	1	747	74.97	1161

Ortholog group

Species	Genes
Allium cepa	g141409.t1
Allium fistulosum	AfisC6G00066
Allium sativum	Asa8G05948.1
Arabidopsis thaliana	AT1G52150.1; AT1G52150.2; AT1G52150.3; AT4G32880.1
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00046.26	Homeobox	Domain	18	75	57.7	6.9e-16
PF01852.16	START	Domain	161	369	173.9	2.6e-51
PF08670.8	MEKHLA	Domain	691	744	44.4	1.3e-11

Gene Ontology

Accession	Ontology	Name
GO:0000003	P	reproduction
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0003006	P	developmental process involved in reproduction
GO:0003674	F	molecular_function
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007275	P	multicellular organism development
GO:0009653	P	anatomical structure morphogenesis
GO:0009790	P	embryo development
GO:0009888	P	tissue development
GO:0008150	P	biological_process
GO:0008284	P	positive regulation of cell proliferation
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009733	P	response to auxin
GO:0009791	P	post-embryonic development
GO:0009793	P	embryo development ending in seed dormancy
GO:0009889	P	regulation of biosynthetic process
GO:0009933	P	meristem structural organization
GO:0010014	P	meristem initiation
GO:0010016	P	shoot system morphogenesis
GO:0010033	P	response to organic substance
GO:0010065	P	primary meristem tissue development
GO:0010067	P	procambium histogenesis
GO:0010072	P	primary shoot apical meristem specification
GO:0010087	P	phloem or xylem histogenesis
GO:0010089	P	xylem development
GO:0010154	P	fruit development
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0022414	P	reproductive process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0042127	P	regulation of cell proliferation
GO:0042221	P	response to chemical
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0045595	P	regulation of cell differentiation
GO:0045597	P	positive regulation of cell differentiation
GO:0048316	P	seed development
GO:0048367	P	shoot system development
GO:0048507	P	meristem development
GO:0048508	P	embryonic meristem development
GO:0048518	P	positive regulation of biological process
GO:0048522	P	positive regulation of cellular process
GO:0048532	P	anatomical structure arrangement
GO:0048608	P	reproductive structure development
GO:0048731	P	system development
GO:0048856	P	anatomical structure development
GO:0050789	P	regulation of biological process
GO:0050793	P	regulation of developmental process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051094	P	positive regulation of developmental process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0061458	P	reproductive system development
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:0090421	P	embryonic meristem initiation
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09338	HD-ZIP; homeobox-leucine zipper protein	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network