result

Gene information

Detail information of g142836

Location

Gene	Chr	Start	End	Strand
g142836	CHR2	131368019	131369539	+

Sequences

CDS

>g142836.t1
ATGAATATCTTTTCCCAGGCCGCTCTCTCCATTTTCATTTCAACAGTCCTACATGCAATAATATTCATCAATAAAAAGCGGAAACTACCACCAGGCCCTTTCGCTTTCCCAATCCTCGGCAATCTCTTATGGCTCAGACAATCTGCCTCATCAATGGAATCAGTTCTCAAGAACCTCTTCAAAATGTACGGACCGATCATAACCGTACACATTGGTTCTCGTCCCATGATATTCATTCAAGATCGATCAATTGCGCACAAAGCCCTCATCGAGCACGGCGCTACCTTTTCCAGTCGACCAGCTCCCGGTCCTGCTACCACATTCGTAAGCAGTAATCAGCATACTATTTCCTCAGCTGGTTACGGTCCTTTATGGCGTCTTTTACGAAGGAACCTCATGTCCGAAATCCTTAACGCATCGAGAGTCAAAATTTATGGAGAAGGTCGTGATTGGGTGCTTGAAGTTCTGATCAAGGATCTTTCTCAAAAGTCCAAGAATTCAGAAGATGGCAGTGTTGTTGTGAAAGATAGCATTCAGTTTGCTATGTTTTGCTTGTTGGTGCTCATGTGTTTTGGGGAGAAGCTCGATGAGAAAGAGATCAGAGAGATTGGAAAAGTGCAAAGAGATATCCTTTTGTATTTGAGAAAGCTTAATGCTGTCGGGTTTTTCCCTAAGATTGCGAAGTATGTGTTTTACAAAAGATGGAAGACTGCAAATGATATGAAAAGGAAACAGATAGATTTATTGTTGCCTTTGATTAAGACGAGGAGAGAGCATAAACTGATGCAAAAGGAAACCAAAGAAAGATTTGTTTACTCCTACTTAGATTCTCTTCTTGATGTTAAATTACCAGACGAAAGGGGTAGAAGTCTAACTGAAGATGAGATGGTAAGCCTTTGTTCTGAGTTTTTGACTGCAGGAACTGATACAACTGCAATTGGGTTACAGTGGATCATGGCAGAGCTTGTGAAAAATCAGCATGTACAGAAGAAACTAGTTGAGGAGATAGAGAGCGTGGTTAAGCATGAAGGAAGAGTGAAAGAAGAGGAACTGAATAAAATGCCATACTTGAAAGCTGTTGTTTTGGAAGGTTTGAGAAGGCATCCGCCTAGTCATTTTTTGTTAGCGCATTCGGTGACTCAAGAAGTTGAATTTGAAGGGTATGTTGTACCGAAAAATGTGAATATTAATTTTATGATTGCAGACATAGGGTTGGATGAGAAGACATGGGATGATCCAATGGAATTTAGACCAGAAAGGTTTTTGAATGGAGGAGAAGGTGAAGGAGTAGATATCACTGGAAGCAGAGAGATCAAGATGATGCCTTTCGGAGTTGGAAGAAGAATTTGTCCTGGACTTGGACTTGCTATGTTGCACCTGGAATTTTTTGTTGCCAATTTAGTTAGAGAGTTTGAGTGGAAATGCGTCGAAGGAGACAAGGTTGATTTATCTGAGTTAACTGAGTTTCATGTTGCCATGAAGCATCCTTTGCACGCTCGCTTGATCCCAAGGAGGAATTAA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020240692.1	2.7e-202	cytochrome P450 89A2-like isoform X1
Swissprot	Q9SRQ1.1	4.5e-130	Cytochrome P450 89A9
trEMBL	A0A2I0A3V3	2.2e-182	Cytochrome P450 89A2

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G64940.1	53.44	8e-154	540	CYP89A6	cytochrome P450, family 87, subfamily A, polypeptide 6

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g142836	AT1G64940.1	509	217	7	10	506	10	510	53.44	8e-154	540
g142836	AT1G64950.1	486	200	6	29	506	32	509	55.56	1e-150	530
g142836	AT2G12190.1	486	198	7	29	506	32	511	56.38	2e-149	525

Ortholog group

Species	Genes
Allium cepa	g119091.t1; g142836.t1; g337096.t1; g337098.t1
Allium fistulosum	AfisC1G02994; AfisC1G03062; AfisC2G05647; AfisC2G05648
Allium sativum	Asa0G05106.1; Asa1G02674.1; Asa1G02675.1; Asa3G04028.1; Asa6G02904.1; Asa7G05723.1; Asa7G05726.1
Arabidopsis thaliana	AT1G64900.1; AT1G64930.1; AT1G64940.1; AT1G64950.1; AT2G12190.1; AT5G61320.1
Oryza sativa	LOC_Os01g24810.1; LOC_Os06g22340.1; LOC_Os08g05620.1; LOC_Os10g36960.1; LOC_Os10g36980.1; LOC_Os10g37050.1; LOC_Os10g37100.1; LOC_Os10g37110.1; LOC_Os10g37120.1; LOC_Os10g37160.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	30	494	332.8	2.9e-99

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00512	CYP17A; steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone deacetylase	EC:1.14.14.19 1.14.14.32	Steroid hormone biosynthesis	ko00140
			Ovarian steroidogenesis	ko04913
			Prolactin signaling pathway	ko04917
			Cortisol synthesis and secretion	ko04927
K07408	CYP1A1; cytochrome P450 family 1 subfamily A polypeptide 1	EC:1.14.14.1	Steroid hormone biosynthesis	ko00140
			Tryptophan metabolism	ko00380
			Retinol metabolism	ko00830
			Metabolism of xenobiotics by cytochrome P450	ko00980
			Ovarian steroidogenesis	ko04913

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network