Detail information of g143358


Location
GeneChrStartEndStrand
g143358Scaffold_43382:HRSCAF_426468114929137088-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK69405.10.0e+00uncharacterized protein A4U43_C05F22510
SwissprotQ15KI9.20.0e+00MENH
trEMBLA0A5P1ETN50.0e+00MR_MLE domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G68890.149.920.01255PHYLLOmagnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases

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Ortholog group
SpeciesGenes
Allium cepag143358.t1
Allium fistulosumAfisC7G01164; AfisC7G01165
Allium sativumAsa5G04058.1; Asa6G05286.1; Asa7G04371.1
Arabidopsis thalianaAT1G68890.1
Oryza sativaLOC_Os02g37090.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF16582.2TPP_enzyme_M_2Domain8832174.68e-21
PF02775.18TPP_enzyme_CDomain36548931.11.5e-07
PF13378.3MR_MLE_CDomain71287972.14.4e-20
PF12697.4Abhydrolase_6Domain988123658.71.1e-15

Gene Ontology
AccessionOntologyName
GO:0008152Pmetabolic process
GO:0006732Pcoenzyme metabolic process
GO:0006766Pvitamin metabolic process
GO:0008150Pbiological_process
GO:0009058Pbiosynthetic process
GO:0009108Pcoenzyme biosynthetic process
GO:0009110Pvitamin biosynthetic process
GO:0009987Pcellular process
GO:0010109Pregulation of photosynthesis
GO:0019222Pregulation of metabolic process
GO:0031323Pregulation of cellular metabolic process
GO:0042180Pcellular ketone metabolic process
GO:0042181Pketone biosynthetic process
GO:0042372Pphylloquinone biosynthetic process
GO:0042374Pphylloquinone metabolic process
GO:0042548Pregulation of photosynthesis, light reaction
GO:0042550Pphotosystem I stabilization
GO:0043467Pregulation of generation of precursor metabolites and energy
GO:0044237Pcellular metabolic process
GO:0044249Pcellular biosynthetic process
GO:0044281Psmall molecule metabolic process
GO:0044283Psmall molecule biosynthetic process
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0051186Pcofactor metabolic process
GO:0051188Pcofactor biosynthetic process
GO:0065007Pbiological regulation
GO:0071704Porganic substance metabolic process
GO:1901576Porganic substance biosynthetic process
GO:1901661Pquinone metabolic process
GO:1901663Pquinone biosynthetic process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14759PHYLLO; isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / O-succinylbenzoate synthaseEC:5.4.4.2 2.2.1.9 4.2.99.20 4.2.1.113 Ubiquinone and other terpenoid-quinone biosynthesisko00130

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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