result

Gene information

Detail information of g144730

Location

Gene	Chr	Start	End	Strand
g144730	Scaffold_43553:HRSCAF_426639	33761	38217	-

Sequences

CDS

Protein

Gene

>g144730.t1
ATGGCGGCGGCATGGTGGGGTCGAGGTTGGTCTCGATGGAAGCGTAGATATCGAGGCTACCCTTTGGCATGGCGCGGTGACAGAGGAAGGCTCATGGCAGTTGTGATGTGGGAAAACACATCGACGTCGAGTTGAATAAAGTCGTGGCCTAGGTTTCTTTAATCGCGGTTTGGATTCAAGATTAGGGATTAATAATGTAATTAGTTTAATTATTTAATTAATTAGCTAATTAATTCATCGATTTGTTCATTAAACCCGTATCTTGTTCATACAAGGTCCAAATCGAACGCGATCAGTTGCACAGGATTTGTAATATGGTTAACTATATCTTGGAATTGGATTGGTTGAGATTAGGGCTATTAGAATTTTGCACTAAAATTCAAATTTTGTTCGATTTTAGAAGGAACCAGAACGCGGAAGCAGTAACTGGAAGTTTGGTAAGTTAAAATCACCTCTTTGGATAAATCAATATATTATATAATAGATAAAATTTTACTACTTGTGTTTGGTTGAAACTATTGATTGATTGGTCAAAATATCCGCTTTGAAAAGTAATTAGTATTTAAAATTGAAATGCAGGAAAATTTCTAAAGAAATTTGGATTTCTCAAAATTGTGATTGTTAATTTCCACTTATATTCCTATTGTTTTATTTCATTATAACCCTGTTATATGGATTGTTAATTGCTGAATCTTGATTGTTTAGCACTATTAGTTATGACATTGTTATATACTCAAATCTTAATCCTTTTAGCGTTAAAATCAATGACAACATTGGTTAGGTGCTTTGATGGCTATTGACCTCAATTTAGTATTTTAAAATACTATTAATTGCCGTTTTGCTAGAAATTTGTTATTGATTCGGTGAATGATTTTAAATCTAACCTCTGGGTTTTCGAAATTTTTTTATTTGAGCGGATTTTGAACTTCTCTATTTTACCCCAACATTTATGTTTGTCTTTTCTAGCCCATTTAGAAATATTTTAAAGTTTTTTAACTATTGTTTGATAATGTTTAAAAAATTATTTATTTATATTTAATTGTTTGAAGTTATTTATCAATATTTTGATATTGTACAAAGTTAATTATTTAAATAATCAATGTTGTTTGAACATAACAATTATTAGTTATTAAAAATGTTTTGGAATTATAATAGTTGTTTATTAATAACGTTTTAGAATTAATAATTGTTATTTATTAATAATGTTCTGGAAGTTAAGTATTATTTAGTATAATAGTGTTTGAAGATTAATTATTGTTGTTTTATTAATAATGTTGAAATTATCAACAACTATATTTATAATGTTTGAAGTTAATAATTATTATTTATTAGTAATGTTTTGTTGTTAATAATTATAATTATAATAATGTTTTGAAGTAAACAATTATTATTTATTTATAGTGTTTTGAAGTTATTAATTATTATATTAATAATGTTTTGGAGTTAATAAATTATTTTATTAATGATGTTGGAAAATTAATTTATTATTTATTTAGGATGTTTATAATTTATCTAATTAATTGTATTTATAAATAATAAATTGATTTCTAAAAGGTATCTCGTTTAATAAAAGAGTTTTATTAAAGAGTTTATAAATGAAAATGGTGTTTGGATTTATAAGAATTTTTAAAAGGCATTATAAAGGATTTTTCATAAAGAAGTTTTATAAAGGATTTTTGGATATTTATAAAAGATGTTTATAAATGATTTTGGATATATGTAGAAGAGTTTTATAAATGGATTTGGAATTAGTAAAGGAGATGTTCATAAATGAAAGAGATTTATTAAAAAGGATTTGTTGAAGAAATTTATAAAAGAAACTAAGATTTGATTTCCTCAAATTTACCTTCTTAATTTTGGTAGTGTGGACATTCGTTCCATGCTTAATACCGAAGGAATAATGTTTAAGTTTATCCTTATCTTCGTTTCTTTTAAAACAATAATTGTTTTAATCATTTTGATATGATTTCGAAGAAAAGAAATCTTTTATAATGTTTTGTGAATATACTTATACTACCGAGATAAGTATATAAATACATTTTCTAAGTAGAAAAGGTGTAGTGTTTTTGTGAATATACTTATACCATTGAGATAAGCATATGGGTATTTTTTTCAAGTATTGAAAAGAGTATAATGAGTTTATGAATATATGTTTGTAAAAAAAATTTGATACAAGTATTTACAAAGTGATTTAAATTAATGAAAGGATTAGTTAAAGATGTTAATGGTTGCTTATGTGCTTAACCAAATGTTGGTTTTCCTATGGTAAATAAATCCCCGATTGATTGTTGTTTTATTTGATAGTTAGATAACTGACTGGTTATTTTTAAACTATCATTGTCGGTTCGAAGAGACCGAGATCAGATAAGTATGAATTATCAGAAAACCACTTTGAACCGATTCAAGTGTTCGAATTGGAAGCACCTTGAAGATGATGGTACCAAAGACAAAGAACTTTGAAGTGCAAGGGATACTTGCTACTAATCTTGAAGGTGATTCCAAAATGGATGCAGTAGAAGTAGTGCCTTCGATTTGTTCATATCCTGAACAGCTGGTATGGACGAATATCGGTGCTGCATTTCTGCTTGGAGTGCAGTGTTAGCATTTCAAGTGGGATTGTTATTCAAAAAGGTAAAACGTATCATCTAGCCTCATCAACTAAGAATGATTAAAATAGGGGTATGCAGCAGGGCTAAGTGAGTCGGACCCATTGGGTTATGTTATCGCCCTTCTAGATATATATTTCATTCATGGATTGGGTCAGATCGAGCATATTTTCAGATCTAGTTTGGATGTTCTGGAGCTTTAGGAGACGAGCTGGATGTTCATGACGTATCTCTCATATATTCTTTATTTCTGCGGCATGTATTGGTTTATTTATTAGCATTTATGAGAACAGATTGTTATAATTATCCAAATTGATGGTTTGCTTAGTGTATTCTGATTGATGCATGTATGTTGCAGATTTTCTTAATCTCTTTCTTTTTCTCCAACCATCTATCTTTTCGGCACTTGTAGCTCAGCACGCGAATATCATGGATGTATTAGTGTTGACTTTTGAGGGTCGAAAAAGCGGATCGTTACAACATGTTGGCCAAGAATGCAGATGGAAACTTTTTCATGGAATGCACTCAGACCTCCTCGTAATGTAGCTCTTCTTTCTGCTCTTGTTGTGACTGTCTTGGCTATTGTAGGCATGTTATATGTCGGGTATTGCTTTTTTAACTTGAACATATGTTTTCCTCCCGCACTTTATTTTTCTGCATTACTGCTACTTAGAGTCCACATAATTTAGTTGTAGTTTAGTACTAGTAAAGAGTTTAAAGTGCTGGTGCACATAACAGTATATGTATTGATGATATATTTGCATGCACTATGACTATGAGTTTGCATGGTTTCTGTAGTGCTGGACTCTTTGTTCCAATGTATGTTTTAGTATACATATTCAGTGAGGTTGGAGCATGGATTTCTCCTTACCATCCCACCATCAATAGAAAAACAGACAGCTTGCATCTTAATCACATGAGTCCATATCTTTCTCAAGATATGTGGTTTTGGATTTTGTTTTGGGGACGCACGTCCTTTTTTTGTTTACTTAAAAATTTTCTTGGCAAACACGCATGTGCGTTATTCTTAAACCATTCTCGCACGTGCCACAGTTTTACGCTGCTTCCAATTTTCCTCATCTTTTAGCTAAATTTTGTCCTCTATTTATTGCAAATATTTCCTTCAATACACGAGCTCATTCTCTCTTTTCTGTATTCTTAGGCGAGAATCTATTATCATGACTTTCCTAGTGGACACAAGTTTAGTGTTTGTGAACATGCGTCATTATTAATTTATCATGCTTAGTGTGTTTATGAAGTTAAGAAACACACTTTTATACTATTTTCTTTCTATTCTCAAACTTCAATCATCCAGTCATCTGGACCTTCAGCTCATTCGTCCGACCTCTATATCAGACATCTGGTTGGGATGTTCAGACTTCTGAACCAAACGTTTGAATCGTGTTTTAGAAGAAAAAAAATTGCCTTCTCCGCTCAAGAAGAAGCGAAGAAAATACTGTATTTTCATATCCATTTTAACTATTTTTAATATCCTTCTCAGTATATGACCTGAATATGCTAATCTTGTAAATGTACATATGTATGAAGTTTACGTTTAATTTGACGGCGAAAAATATAATTAGTATGGATCTTGGTGAGGCGGAAACCGAGAAGTTAATGCTGGAATACATCACTCTCATGAAAGGAGTAATTTCTGCTCCATTGAATTTTCCAGGAACGCCCCATTGGAAAGCTTTAAAGGTTACATTTTGATTTACGCTTTTCATTTTCACTTGTTCAATCTTGTTTTATTATGTTTAGCAGTTGGAATATTCTTAAATGCATGGTCTAAAAACTTCTTTTATTGGTTGCTTCACCATCTCGTCCCAGAACATGGTGCTAAAATGTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008778138.1	7.7e-12	cytochrome P450 90B2-like isoform X1
Swissprot	Q5CCK3.1	7.5e-12	Steroid 22-alpha-hydroxylase
trEMBL	A0A8B7BJ37	5.5e-12	cytochrome P450 90B2-like isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G50660.1	55.74	3e-11	65.1	AtDWF4;CLM;CYP90B1;DWF4;PSC1;SAV1;SNP2	Cytochrome P450 superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g144730	AT3G50660.1	61	17	1	143	193	174	234	55.74	3e-11	65.1

Ortholog group

Species	Genes
Allium cepa	g144730.t1
Allium fistulosum	AfisC5G04708; AfisC5G04715
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
-	-	-	-	-	-	-

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0000902	P	cell morphogenesis
GO:0001101	P	response to acid chemical
GO:0008152	P	metabolic process
GO:0016049	P	cell growth
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004497	F	monooxygenase activity
GO:0007165	P	signal transduction
GO:0005783	C	endoplasmic reticulum
GO:0005623	C	cell
GO:0005737	C	cytoplasm
GO:0043231	C	intracellular membrane-bounded organelle
GO:0055114	P	oxidation-reduction process
GO:0016491	F	oxidoreductase activity
GO:0006629	P	lipid metabolic process
GO:0006694	P	steroid biosynthetic process
GO:0040007	P	growth
GO:0007154	P	cell communication
GO:0007275	P	multicellular organism development
GO:0009653	P	anatomical structure morphogenesis
GO:0008150	P	biological_process
GO:0008202	P	steroid metabolic process
GO:0008395	F	steroid hydroxylase activity
GO:0008610	P	lipid biosynthetic process
GO:0009058	P	biosynthetic process
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009741	P	response to brassinosteroid
GO:0009753	P	response to jasmonic acid
GO:0009755	P	hormone-mediated signaling pathway
GO:0009826	P	unidimensional cell growth
GO:0009867	P	jasmonic acid mediated signaling pathway
GO:0009965	P	leaf morphogenesis
GO:0009987	P	cellular process
GO:0010012	F	steroid 22-alpha hydroxylase activity
GO:0010016	P	shoot system morphogenesis
GO:0010033	P	response to organic substance
GO:0010268	P	brassinosteroid homeostasis
GO:0010358	P	leaf shaping
GO:0010817	P	regulation of hormone levels
GO:0012505	C	endomembrane system
GO:0014070	P	response to organic cyclic compound
GO:0016043	P	cellular component organization
GO:0016125	P	sterol metabolic process
GO:0016128	P	phytosteroid metabolic process
GO:0016129	P	phytosteroid biosynthetic process
GO:0016131	P	brassinosteroid metabolic process
GO:0016132	P	brassinosteroid biosynthetic process
GO:0023052	P	signaling
GO:0070887	P	cellular response to chemical stimulus
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0032870	P	cellular response to hormone stimulus
GO:0032989	P	cellular component morphogenesis
GO:0033993	P	response to lipid
GO:0042221	P	response to chemical
GO:0042445	P	hormone metabolic process
GO:0042446	P	hormone biosynthetic process
GO:0042592	P	homeostatic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0044238	P	primary metabolic process
GO:0044424	C	intracellular part
GO:0044444	C	cytoplasmic part
GO:0044464	C	cell part
GO:0048366	P	leaf development
GO:0048367	P	shoot system development
GO:0048532	P	anatomical structure arrangement
GO:0048589	P	developmental growth
GO:0048731	P	system development
GO:0048827	P	phyllome development
GO:0048856	P	anatomical structure development
GO:0048869	P	cellular developmental process
GO:0048878	P	chemical homeostasis
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051716	P	cellular response to stimulus
GO:0055088	P	lipid homeostasis
GO:0060560	P	developmental growth involved in morphogenesis
GO:0065007	P	biological regulation
GO:0065008	P	regulation of biological quality
GO:0071229	P	cellular response to acid chemical
GO:0071310	P	cellular response to organic substance
GO:0071395	P	cellular response to jasmonic acid stimulus
GO:0071495	P	cellular response to endogenous stimulus
GO:0071704	P	organic substance metabolic process
GO:0071840	P	cellular component organization or biogenesis
GO:0080132	F	fatty acid alpha-hydroxylase activity
GO:0099402	P	plant organ development
GO:1901360	P	organic cyclic compound metabolic process
GO:1901362	P	organic cyclic compound biosynthetic process
GO:1901576	P	organic substance biosynthetic process
GO:1901615	P	organic hydroxy compound metabolic process
GO:1901617	P	organic hydroxy compound biosynthetic process
GO:1901700	P	response to oxygen-containing compound
GO:1901701	P	cellular response to oxygen-containing compound
GO:1905392

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09587	CYP90B1, DWF4; steroid 22-alpha-hydroxylase	EC:1.14.13.-	Brassinosteroid biosynthesis	ko00905

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network