result

Gene information

Detail information of g145340


Location
GeneChrStartEndStrand
g145340Scaffold_19351:HRSCAF_1920466587274673+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrQKZ93459.11.9e-78WRKY33
SwissprotQ6B6R4.12.9e-68WRKY transcription factor WRKY24
trEMBLA0A7S8F9L22.4e-83Abiotic stress-related transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT2G38470.151.567e-65 244ATWRKY33;WRKY33WRKY DNA-binding protein 33

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag145340.t1; g451471.t1
Allium fistulosumAfisC3G06830; AfisC3G06833; AfisC3G07098
Allium sativumAsa2G05606.1; Asa2G05607.1; Asa2G05608.1; Asa2G05609.1; Asa2G05888.1; Asa2G05889.1; Asa2G06099.1; Asa2G06100.1; Asa3G04989.1; Asa8G04341.1
Arabidopsis thalianaAT5G07100.2
Oryza sativaLOC_Os01g61080.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03106.12WRKYDomain126880.01.1e-22
PF03106.12WRKYDomain17322034.81.4e-08

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0001067Fregulatory region nucleic acid binding
GO:0001101Presponse to acid chemical
GO:0006790Psulfur compound metabolic process
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006952Pdefense response
GO:0042742Pdefense response to bacterium
GO:0050832Pdefense response to fungus
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006725Pcellular aromatic compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0006950Presponse to stress
GO:0006970Presponse to osmotic stress
GO:0008150Pbiological_process
GO:0009058Pbiosynthetic process
GO:0009266Presponse to temperature stimulus
GO:0042493Presponse to drug
GO:0009403Ptoxin biosynthetic process
GO:0009404Ptoxin metabolic process
GO:0009408Presponse to heat
GO:0009409Presponse to cold
GO:0009414Presponse to water deprivation
GO:0009415Presponse to water
GO:0009605Presponse to external stimulus
GO:0009607Presponse to biotic stimulus
GO:0051707Presponse to other organism
GO:0009617Presponse to bacterium
GO:0009620Presponse to fungus
GO:0009628Presponse to abiotic stimulus
GO:0009651Presponse to salt stress
GO:0009700Pindole phytoalexin biosynthetic process
GO:0009889Pregulation of biosynthetic process
GO:0009893Ppositive regulation of metabolic process
GO:0009894Pregulation of catabolic process
GO:0009896Ppositive regulation of catabolic process
GO:0009987Pcellular process
GO:0010033Presponse to organic substance
GO:0010035Presponse to inorganic substance
GO:0010120Pcamalexin biosynthetic process
GO:0010200Presponse to chitin
GO:0010243Presponse to organonitrogen compound
GO:0010286Pheat acclimation
GO:0010468Pregulation of gene expression
GO:0010506Pregulation of autophagy
GO:0010508Ppositive regulation of autophagy
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0044212Ftranscription regulatory region DNA binding
GO:0018130Pheterocycle biosynthetic process
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0019438Paromatic compound biosynthetic process
GO:0019748Psecondary metabolic process
GO:0033554Pcellular response to stress
GO:0031323Pregulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031329Pregulation of cellular catabolic process
GO:0031331Ppositive regulation of cellular catabolic process
GO:0034605Pcellular response to heat
GO:0034641Pcellular nitrogen compound metabolic process
GO:0042221Presponse to chemical
GO:0042430Pindole-containing compound metabolic process
GO:0042435Pindole-containing compound biosynthetic process
GO:0043207Presponse to external biotic stimulus
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043565Fsequence-specific DNA binding
GO:0044237Pcellular metabolic process
GO:0044249Pcellular biosynthetic process
GO:0044271Pcellular nitrogen compound biosynthetic process
GO:0044272Psulfur compound biosynthetic process
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0044550Psecondary metabolite biosynthetic process
GO:0046217Pindole phytoalexin metabolic process
GO:0046483Pheterocycle metabolic process
GO:0048518Ppositive regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051704Pmulti-organism process
GO:0051716Pcellular response to stimulus
GO:0052314Pphytoalexin metabolic process
GO:0052315Pphytoalexin biosynthetic process
GO:0052317Pcamalexin metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0070370Pcellular heat acclimation
GO:0071704Porganic substance metabolic process
GO:0080090Pregulation of primary metabolic process
GO:0097159Forganic cyclic compound binding
GO:0098542Pdefense response to other organism
GO:1901360Porganic cyclic compound metabolic process
GO:1901362Porganic cyclic compound biosynthetic process
GO:1901363Fheterocyclic compound binding
GO:1901564Porganonitrogen compound metabolic process
GO:1901566Porganonitrogen compound biosynthetic process
GO:1901576Porganic substance biosynthetic process
GO:1901698Presponse to nitrogen compound
GO:1901700Presponse to oxygen-containing compound
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13423WRKY25; WRKY transcription factor 25EC:- MAPK signaling pathway - plantko04016
Plant-pathogen interactionko04626
K13424WRKY33; WRKY transcription factor 33EC:- MAPK signaling pathway - plantko04016
Plant-pathogen interactionko04626

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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