result

Gene information

Detail information of g148920


Location
GeneChrStartEndStrand
g148920Scaffold_44086:HRSCAF_427172659133692860-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020267308.11.1e-86squamosa promoter-binding-like protein 14 isoform X2
SwissprotA3C057.23.3e-54Squamosa promoter-binding-like protein 17
trEMBLA0A8B7BGI72.0e-69squamosa promoter-binding-like protein 14 isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G57920.143.885e-42 170SPL15squamosa promoter binding protein-like 15

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag148920.t1
Allium fistulosumAfisC4G01375
Allium sativumAsa4G01266.1
Arabidopsis thaliana
Oryza sativaLOC_Os08g39890.1; LOC_Os09g31438.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03110.11SBPDomain69142109.18.1e-32
PF03110.11SBPDomain51253832.56.9e-08

Gene Ontology
AccessionOntologyName
GO:0000003Preproduction
GO:0003006Pdevelopmental process involved in reproduction
GO:0003674Fmolecular_function
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0007275Pmulticellular organism development
GO:0008150Pbiological_process
GO:0008361Pregulation of cell size
GO:0009791Ppost-embryonic development
GO:0009889Pregulation of biosynthetic process
GO:0009908Pflower development
GO:0009987Pcellular process
GO:0010228Pvegetative to reproductive phase transition of meristem
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0016043Pcellular component organization
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0022414Preproductive process
GO:0022603Pregulation of anatomical structure morphogenesis
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0032535Pregulation of cellular component size
GO:0042127Pregulation of cell proliferation
GO:0048366Pleaf development
GO:0048367Pshoot system development
GO:0048437Pfloral organ development
GO:0048438Pfloral whorl development
GO:0048443Pstamen development
GO:0048466Pandroecium development
GO:0048608Preproductive structure development
GO:0048653Panther development
GO:0048731Psystem development
GO:0048827Pphyllome development
GO:0048831Pregulation of shoot system development
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050793Pregulation of developmental process
GO:0050794Pregulation of cellular process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051239Pregulation of multicellular organismal process
GO:0051252Pregulation of RNA metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0061458Preproductive system development
GO:0065007Pbiological regulation
GO:0065008Pregulation of biological quality
GO:0071840Pcellular component organization or biogenesis
GO:0080090Pregulation of primary metabolic process
GO:0090066Pregulation of anatomical structure size
GO:0090567Preproductive shoot system development
GO:0099402Pplant organ development
GO:1900618Pregulation of shoot system morphogenesis
GO:1901371Pregulation of leaf morphogenesis
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000024Pregulation of leaf development
GO:2000025Pregulation of leaf formation
GO:2000026Pregulation of multicellular organismal development
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110
GO:1905421
GO:1905428

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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