result

Gene information

Detail information of g148965

Location

Gene	Chr	Start	End	Strand
g148965	Scaffold_44089:HRSCAF_427175	56406	59440	-

Sequences

CDS

>g148965.t1
ATGAATACCAAAAGCAGAACAGTGTCGCCTCTTACCTTGCTTCTAATCAAAATCTTACTTCATTTCAATACATCATCAGCAACCGCCAAAGACACCGTTTCAAAAGGAGAATTTCTCTCTGGGAACCAAACCATTAGCTCCAAAAACGGTAGGTTCGAACTTGGTTTCTTCACACCAGGAAGCTCAGGCAACTACTACATAGGCATATGGTACAAATCCCTTCCAAATCAAACTGTCGTCTGGGTTGCAAATAGACAATCTCCAGTCAAAGACCCATCCTCTACAAAACTCCTCTTCTCCAAAACCGGCAACCTAATCATCCTCTCAACCGCATCAATCAACAACACCGTTCCAGTATGGTCAACAAACTCGACTACATCATCCACAACCGCAGCAGCAGTGCTACTGAACACGGGCAACCTAATACTACTGGTTAACGGGTCGGATCTGAACTCGGCCCATGTTTGGCAAAGCTTCGATGATCCTACAGACACTTCGCTCCCTGGAAGCTGGATCGGTGTGAACAAAATAACAGGAGAGTACCAGAGACTGACTTCGTGGAAGAACTCAGAAGACCCGTTTCCAGGTTTATTCTCAGAAGGCATGGACCTCGATGGTTCCAATCAGTACGTTTTATACCGTAACTTGACTAAGATATTTTGGTATAGTGGTCTCTGGAATGGGTTTTACTTTGAGGGCTTACCTACGACTACTCAGAAGAGCATTTTCAACTTCAGCTTCGTGGATGAGAAGGACAGGAAGTACTCTACGTACACTGTTGCTAGAGATGATATAATAACTAGAGGTGTTATGGGTACAAGCGGGCAGCTGGTTCAGTACATTTGGTTCGAAGGCAGTCAGCAATGGCAGACGGTCTCGGCTTTTCCGGCTCGTCACTGTGATGTGTACCAACTGTGTGGGCCTTTTGGGGTATGTGAAGAGAAAAGGACAAGTGTTTGTCAGTGTAGCTTTGGGTTTCAGCCAGCAAGCGGCCGGGATTGGAAACTGAATGATTGGAGCAAGGGTTGTGTAAGGAGTTCACAGTTGCAGTGTGCCGGAGATTGGTTTTATAAGATGGACAATATGAGACTGCCTGATGACCCATATTGGAATTTAACTGTCGGTGGTATATTAGATTGTGAAGGTTCCTGTAGAAATGACTGTTCTTGCAATGCGTACGCTTACGATGATAATAAAGGTTGCTCGCTTTGGAAAGTGGAGCTTCAGAACATTCATCAACTATACGATGGTGATACAGGAGGCGCTGCCCTTTTCCTTCGGCTTTCAGCTCGTGACATGCCTCCAGGTCCGATTAGTTCGCAAAGTTCACATAAGACTAATAATTACATCAGCCTTATTCTTGGTTTAGTACTATCAAGTGTCATTTTGATCATGTTACTTTTGATTGGATTAGCTCGTGTTTATCAAAACAAGAAACGAGCACGCCTATTCAAGAAGGCAGATGGATCACTCATTCGATTTCATTATAAAGAACTGCAACATATGACCAAAAATTTCAAGGTGAAACTGGGAAGTGGGGGATTTGGAACCGTGTACAAAGGTGAAATGCCTGGTTCAACCTCGATAGCTATAAAGACTTTAGAAGGACTGCGTCAAGGAGAGAAGCAATTTAGAGCAGAAGTGAGCACTTTAGGCACCATTCAACACGTGAATCTGGTGCGTCTTGTTGGGTTTTGCTTTGAAGGCAGCAACAACAAAAAACTGTTAGTCTACGAGCTTATGCCAAAAGGATCTTTAGATGCCCATCTATTTAAAGGCACCTCGGTACTGAATTGGAGCACTAGGTACCAAATTGCTTTAGGCACCGCAAGGGGATTGACTTATCTGCATGAGCAGTGCAGAGAGCGTATCATACATTGCGACATTAAACCTGATAATATACTTTTGGATGAGTCTTTTATCCCAAAGGTGGCGGATTTTGGGTTGGCAAAGCTGTATGATCGTGACTTTAGCAAAGTTCTGACATCTATGAGAGGGACCATCGGTTATCTTGCACCTGAATGGATATCAGGGTCTGAAATAACGCCTAAAGTGGATGTTTATAGCTATGGGATGATGTTGTTTGAAATAATATCTGGTAAACGAAACAGAGAAAACAACGATGTAGAAGATGAATCCTACTACTATCCTTCATGGGCTGCGAAACAGATTAGGAAGGGAGATGTGATGAGCATATTGGATGCAAGATTGAATGGTGTTGCGAACATAGAACAGGTGAGTAGAGTTGGCAAAGTTGCAATTTGGTGCGTTCAAGACATGGAGGAGCGTAGGCCCACAATGGGCCAAATCGTACATATTCTAGAGGGACTATTGGAGGTCAATATGCCTCCTATTTCTCACACTTTGCAAATCAATGATCAAGAAGAAGAAAAGAAAATTGATGGCATCTCGGTTGACTGTAGAAATTCTAATACAAAATTATTGCACCTTTTTCTCCCAAAATCATGTACATCCCGTCAGGTCCAAAGCCCAACAACAAAGGTCCGTATAGCATCCTCCAGCCTAATAATCCGTCCATATGATATGCCCACATCCATATCGCCTAGTTGCCTCACAATCATTCCCCGAGACCTTGCTTGTCATTCTCTTAAGGACAAGAGTGGGCCTCAAGTTTCCCGGGCAGCATCTTCCGGCAAACCTCTGTGCACCTCCTCGTCCTGTCCCTTACCAACCAAGTCACAAAGTCTAACTCACGAATCTATTTTTCTGCCTATGAGTTCTCTCCATACTGTTCCCTGTTCGTGGGGACTCCTCGCCGACCAACTCATCTACCGCTTTGTTGTCACAAGTCGGCAAACTTCTGCAGAAGCTCTTGATTACGCTGCAACAAGAGCGGCGGTCCCGTACTGTTCGTCTGACAAAAGCCTCCACAACTGCACTGTTTATGGACAAAAGTGTCATTATTCCACAAGCGCTCATTGGACTTTATTATCGATGTAA

Protein

Gene

>g148965.t1
ATGAATACCAAAAGCAGAACAGTGTCGCCTCTTACCTTGCTTCTAATCAAAATCTTACTTCATTTCAATACATCATCAGCAACCGCCAAAGACACCGTTTCAAAAGGAGAATTTCTCTCTGGGAACCAAACCATTAGCTCCAAAAACGGTAGGTTCGAACTTGGTTTCTTCACACCAGGAAGCTCAGGCAACTACTACATAGGCATATGGTACAAATCCCTTCCAAATCAAACTGTCGTCTGGGTTGCAAATAGACAATCTCCAGTCAAAGACCCATCCTCTACAAAACTCCTCTTCTCCAAAACCGGCAACCTAATCATCCTCTCAACCGCATCAATCAACAACACCGTTCCAGTATGGTCAACAAACTCGACTACATCATCCACAACCGCAGCAGCAGTGCTACTGAACACGGGCAACCTAATACTACTGGTTAACGGGTCGGATCTGAACTCGGCCCATGTTTGGCAAAGCTTCGATGATCCTACAGACACTTCGCTCCCTGGAAGCTGGATCGGTGTGAACAAAATAACAGGAGAGTACCAGAGACTGACTTCGTGGAAGAACTCAGAAGACCCGTTTCCAGGTTTATTCTCAGAAGGCATGGACCTCGATGGTTCCAATCAGTACGTTTTATACCGTAACTTGACTAAGATATTTTGGTATAGTGGTCTCTGGAATGGGTTTTACTTTGAGGGCTTACCTACGACTACTCAGAAGAGCATTTTCAACTTCAGCTTCGTGGATGAGAAGGACAGGAAGTACTCTACGTACACTGTTGCTAGAGATGATATAATAACTAGAGGTGTTATGGGTACAAGCGGGCAGCTGGTTCAGTACATTTGGTTCGAAGGCAGTCAGCAATGGCAGACGGTCTCGGCTTTTCCGGCTCGTCACTGTGATGTGTACCAACTGTGTGGGCCTTTTGGGGTATGTGAAGAGAAAAGGACAAGTGTTTGTCAGTGTAGCTTTGGGTTTCAGCCAGCAAGCGGCCGGGATTGGAAACTGAATGATTGGAGCAAGGGTTGTGTAAGGAGTTCACAGTTGCAGTGTGCCGGAGATTGGTTTTATAAGATGGACAATATGAGACTGCCTGATGACCCATATTGGAATTTAACTGTCGGTGGTATATTAGATTGTGAAGGTTCCTGTAGAAATGACTGTTCTTGCAATGCGTACGCTTACGATGATAATAAAGGTTGCTCGCTTTGGAAAGTGGAGCTTCAGAACATTCATCAACTATACGATGGTGATACAGGAGGCGCTGCCCTTTTCCTTCGGCTTTCAGCTCGTGACATGCCTCCAGGTCCGATTAGTTCGCAAAGTTCACATAAGACTAATAATTACATCAGCCTTATTCTTGGTTTAGTACTATCAAGTGTCATTTTGATCATGTTACTTTTGATTGGATTAGCTCGTGTTTATCAAAACAAGAAACGAGCACGCCTATTCAAGAAGGCAGATGGATCACTCATTCGATTTCATTATAAAGAACTGCAACATATGACCAAAAATTTCAAGGTGAAACTGGGAAGTGGGGGATTTGGAACCGTGTACAAAGGTGAAATGCCTGGTTCAACCTCGATAGCTATAAAGACTTTAGAAGGACTGCGTCAAGGAGAGAAGCAATTTAGAGCAGAAGTGAGCACTTTAGGCACCATTCAACACGTGAATCTGGTGCGTCTTGTTGGGTTTTGCTTTGAAGGCAGCAACAACAAAAAACTGTTAGTCTACGAGCTTATGCCAAAAGGATCTTTAGATGCCCATCTATTTAAAGGCACCTCGGTACTGAATTGGAGCACTAGGTACCAAATTGCTTTAGGCACCGCAAGGGGATTGACTTATCTGCATGAGCAGTGCAGAGAGCGTATCATACATTGCGACATTAAACCTGATAATATACTTTTGGATGAGTCTTTTATCCCAAAGGTGGCGGATTTTGGGTTGGCAAAGCTGTATGATCGTGACTTTAGCAAAGTTCTGACATCTATGAGAGGGACCATCGGTTATCTTGCACCTGAATGGATATCAGGGTCTGAAATAACGCCTAAAGTGGATGTTTATAGCTATGGGATGATGTTGTTTGAAATAATATCTGGTAAACGAAACAGAGAAAACAACGATGTAGAAGATGAATCCTACTACTATCCTTCATGGGCTGCGAAACAGATTAGGAAGGGAGATGTGATGAGCATATTGGATGCAAGATTGAATGGTGTTGCGAACATAGAACAGGTGAGTAGAGTTGGCAAAGTTGCAATTTGGTGCGTTCAAGACATGGAGGAGCGTAGGCCCACAATGGGCCAAATCGTACATATTCTAGAGGGACTATTGGAGGTCAATATGCCTCCTATTTCTCACACTTTGCAAATCAATGATCAAGAAGAAGAAAAGAAAATTGATGGCATCTCGGTTGACTGGTAAAAAATATTTGCTTTTTTTAGCATGCTTGCTCCATTCTTTTTGCAAAGTAACGTGTCATATCTTGTACCAGTAGAAATTCTAATACAAAATTATTGCACCTTTTTCTCCCAAAATCATGTACATCCCGTCAGGTCCAAAGCCCAACAACAAAGGTCCGTATAGCATCCTCCAGCCTAATAATCCGTCCATATGATATGCCCACATCCATATCGCCTAGTTGCCTCACAATCATTCCCCGAGACCTTGCTTGTCATTCTCTTAAGGACAAGAGTGGGCCTCAAGTTTCCCGGGCAGCATCTTCCGGCAAACCTCTGTGCACCTCCTCGTCCTGTCCCTTACCAACCAAGTCACAAAGTCTAACTCACGAATCTATTTTTCTGCCTATGAGTTCTCTCCATACTGTTCCCTGTTCGTGGGGACTCCTCGCCGACCAACTCATCTACCGCTTTGTTGTCACAAGTCGGCAAACTTCTGCAGAAGCTCTTGATTACGCTGCAACAAGAGCGGCGGTCCCGTACTGTTCGTCTGACAAAAGCCTCCACAACTGCACTGTTTATGGACAAAAGTGTCATTATTCCACAAGCGCTCATTGGACTTTATTATCGATGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256466.1	5.5e-260	G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
Swissprot	O64477.1	4.4e-198	G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
trEMBL	A0A8B8ZUG0	5.2e-244	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G19130.1	50.50	0.0	738		S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g148965	AT2G19130.1	798	363	18	8	790	2	782	50.50	0.0	738
g148965	AT4G00340.1	768	404	19	32	776	20	761	41.02	2e-145	513
g148965	AT4G11900.1	823	422	32	16	774	15	808	37.42	3e-122	437

Ortholog group

Species	Genes
Allium cepa	g148965.t1
Allium fistulosum	AfisC3G07390
Allium sativum	Asa2G06078.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	77	189	95.1	2.1e-27
PF00954.17	S_locus_glycop	Domain	221	329	95.4	2.7e-27
PF08276.8	PAN_2	Domain	351	410	48.8	5e-13
PF00069.22	Pkinase	Domain	507	772	157.5	3.6e-46

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network