result

Gene information

Detail information of g151449

Location

Gene	Chr	Start	End	Strand
g151449	Scaffold_44433:HRSCAF_427519	204752	207502	-

Sequences

CDS

>g151449.t1
ATGGCAACAAAGTACAAAATTCACCTTCGTATGTATTTTCTCTATTTCGACTTTAATCACCTTTCCTTTCTTGCTGATGCCAGAATCGCTGATTGTATAATCCACCCCCTTTTAGAATCCGTAATTCCATTATTATTTCCTAGGGTTTGCTTCGCTCGAAAGGAAATGAATAATAATTCATACTACCCCAGTGATGAAATTGACAGATCAGATGGTAATGTGCGTGACTTTAACAGTAACACTAGCTTAGAATCCTCAAGAATCCCGAAAGTTGGCATGTATTTTTCTTCAGATGAAGAAGCTTATGATTTCTACAACACATATGCAAAAAATAGTGGGTTTGGTGTGCGTAAAGGGGCAAGTGCAAAAGACGATAATGGTGTGGTCATTAGACGAATTTTTGTATGCCACCGAGAAGGTTTTAAATATTCAAAACATAAGAGGAAAGATGGTCAAGAAGTTAAACCTAGAAAAAGCGAAAGGGGAGGCTGTTGTGCACGCTTGCATGTCCATAAACAAGAAGATGGGCTGTGGAAAGTCAAATATTTCATTGATAGACACAATCACCCGATGATAACTTCACCATCAGAACTTTCTAAACTGAAGTCGCATAGCAAAGAACGTGTTCCTAGAGCCAGTGAACCTTTAGTTATACCTCTAGAAATTGCTAGACCTATAAGTATTAGAATAGGCGATGACTACCAACTGGGTATTGAGCATTTAGGGATGAGTAGAGAGTGCAATCTGACTGATGAGAGTAGATCAATGATACAACAAATTCTTAATAGGCAAGCCACAGAATACGCTTTTTTCTATTCGACCCGAGTTGATGAAGGTTTCAAGTTAACGAGTGCCTTTTGGGCTGACCATAACTCAAGGTTAGCTTATATGAAATTGAGCGATGTTTTGGTCTTTGATATTGCGTACAGAATAGACAATTTTTTGTTGCCATTTGCAACGTTTACTGGCATAAATCAACATAAGAAACCTACATTGTTTGGATGCGCTCTTCTAGGAGACGAGAAAGAAGAAACTTTGGTTTGGTTATTTCAATCTTTCATCTCTTGCATGGGGGACAAAGCACCTGTAGCGATAGTTACCAAGCAAGATCCGATTGTTTGCAAAGCTGTGAAGAAGGTTTTTCCTCGTACTCGTCATAGATTTTGCATGCAGGAGATCCGCCTTCAAGAGGACAGGTTTCTTCATCCTCTACGTTCTTCCTACAACCCTTCATTCGACGAAGATTATAACAAATTCACTAGAAGAAGTCAGACTATAGAGGAATCAGAGAGGTGTTGGTTGTTACTGAAGGATAAATACATGGTTAACTTTGAAGCAAGAGTATGTCGTAGACAAATGAATGAGTTGAAAGCATGGGATTGGCTGGAAAGTATGTACAAAGTAAGACATAAGTGGGTGGAGTCCTACTTAAATGATGTCTTTTTTGCCGGTATCAGATCAATCGAAAGCTCATATTTCGATGGTTTTATAGATTCGATGACACCAGTGCACGAATTCATCTTACAATTCGATAAAGCTGCCTCATTTCACCGTACAAATGAAGAAAAAGATGACTTTTCTTCCATTAGGAGCAAGCTAGACTTCCAGGAAATGTCACCATTAGAAGCTTTTGCTGCAAAAGTTTACACTAACAACGTTTTCGACATTTTCCAACTTGAGTTCAAAAGCACTGTATCTTGTCTAAACGATGAGGTAGGGATGAGGGAAGGATTCATAATATATAAGGTGGTCGGTAAAACCAGTGATGGTGATGCCCACTTGGTGAAATGCAGAGTTTCAGATACTTTTTGTACGTGTTCATGTTCGAAGTTTGAAACTGAAGGGATACCATGCAAACATATATTGTACATTATGATTGAAAAGCTGAAACTGAATCATATTCCAGAGCAGTACATTTTGGGGAGATGGACGCTTAGTTCAGGTATTCGACTCAATGATGAAATGAACATCAATGCTGTAGATCATCGAAAAATCACACCTTTTGAGTCTTCATTGTTTCAAGCAAAACTGAACATGGTATTTGAGAAGGCAACAGAAGATCGAGAATATTACAAGCTTGCTCATGCATTAGTTGATGAATTCTGGAAGCGGGTTGAGTTGGTTAATCAGATACATAAGTGA

Protein

Gene

>g151449.t1
ATGGCAACAAAGTACAAAATTCACCTTCGTATGTATTTTCTCTATTTCGACTTTAATCACCTTTCCTTTCTTGCTGATGCCAGAATCGCTGATTGTGTATCCAAAACGTTAAAAGCGATTACCCGAAACCCGTTAGCTCTAAAACCCTCAAATCTTATAGATAATCCACCCCCTTTTAGAATCCGTAATTCCATTATTATTTCCTAGGGTTTGCTTCGCTCGAAAGGTAAACGTTTTCGATTTTTCATAATTTTATGCTTTCATCCAATGAATTTTTGTTTCATTATGCTGTGAGATATCATGTTCGTTTTTAATTTAGACTCCTTTATTACGGTTTTAATAGTTATTTTATTTTGGCATTCACTTATTTTCAGTTGCTTAAGCTGATTTTGATTATTGACTAGTTTTAATGGATTATTTTGGGAGTTATCCTACACTGAAAGTTTTAAGCGTTTTTGTAGGAAACAACGGATAATACATTATTGGCGAAATCATGTTCATGTTTGATTTAGATTCCAAGATTACGGTTCTAAGAGTTATTTTATGTTATCTTATCTTCAGTTGCTTAAGCAGTTGTGGATGCTTCTTGTATAGATTATTGACTAGTTATAATGGATTATTTTGGAGTTATCTTAACCTGAAATTTTTAACAGTTCTTATGGGGAATTGATAATACATTATTGGTGAAATCACGTCTTGTATAAATCATTGACTAGGTATAGTGAATTATTTTGGAGTTATCTTATGCTGAAATTTTAAGGGTTTTTGTAGGAAATGAATAATAATTCATACTACCCCAGTGATGAAATTGACAGATCAGATGGTAATGTGCGTGACTTTAACAGTAACACTAGCTTAGAATCCTCAAGAATCCCGAAAGTTGGCATGTATTTTTCTTCAGATGAAGAAGCTTATGATTTCTACAACACATATGCAAAAAATAGTGGGTTTGGTGTGCGTAAAGGGGCAAGTGCAAAAGACGATAATGGTGTGGTCATTAGACGAATTTTTGTATGCCACCGAGAAGGTTTTAAATATTCAAAACATAAGAGGAAAGATGGTCAAGAAGTTAAACCTAGAAAAAGCGAAAGGGGAGGCTGTTGTGCACGCTTGCATGTCCATAAACAAGAAGATGGGCTGTGGAAAGTCAAATATTTCATTGATAGACACAATCACCCGATGATAACTTCACCATCAGAACTTTCTAAACTGAAGTCGCATAGCAAAGAACGTGTTCCTAGAGCCAGTGAACCTTTAGTTATACCTCTAGAAATTGCTAGACCTATAAGTATTAGAATAGGCGATGACTACCAACTGGGTATTGAGCATTTAGGGATGAGTAGAGAGTGCAATCTGACTGATGAGAGTAGATCAATGATACAACAAATTCTTAATAGGCAAGCCACAGAATACGCTTTTTTCTATTCGACCCGAGTTGATGAAGGTTTCAAGTTAACGAGTGCCTTTTGGGCTGACCATAACTCAAGGTTAGCTTATATGAAATTGAGCGATGTTTTGGTCTTTGATATTGCGTACAGAATAGACAATTTTTTGTTGCCATTTGCAACGTTTACTGGCATAAATCAACATAAGAAACCTACATTGTTTGGATGCGCTCTTCTAGGAGACGAGAAAGAAGAAACTTTGGTTTGGTTATTTCAATCTTTCATCTCTTGCATGGGGGACAAAGCACCTGTAGCGATAGTTACCAAGCAAGATCCGATTGTTTGCAAAGCTGTGAAGAAGGTTTTTCCTCGTACTCGTCATAGATTTTGCATGCAGGAGATCCGCCTTCAAGAGGACAGGTTTCTTCATCCTCTACGTTCTTCCTACAACCCTTCATTCGACGAAGATTATAACAAATTCACTAGAAGAAGTCAGACTATAGAGGAATCAGAGAGGTGTTGGTTGTTACTGAAGGATAAATACATGGTTAACTTTGAAGCAAGAGTATGTCGTAGACAAATGAATGAGTTGAAAGCATGGGATTGGCTGGAAAGTATGTACAAAGTAAGACATAAGTGGGTGGAGTCCTACTTAAATGATGTCTTTTTTGCCGGTATCAGATCAATCGAAAGCTCATATTTCGATGGTTTTATAGATTCGATGACACCAGTGCACGAATTCATCTTACAATTCGATAAAGCTGCCTCATTTCACCGTACAAATGAAGAAAAAGATGACTTTTCTTCCATTAGGAGCAAGCTAGACTTCCAGGAAATGTCACCATTAGAAGCTTTTGCTGCAAAAGTTTACACTAACAACGTTTTCGACATTTTCCAACTTGAGTTCAAAAGCACTGTATCTTGTCTAAACGATGAGGTAGGGATGAGGGAAGGATTCATAATATATAAGGTGGTCGGTAAAACCAGTGATGGTGATGCCCACTTGGTGAAATGCAGAGTTTCAGATACTTTTTGTACGTGTTCATGTTCGAAGTTTGAAACTGAAGGGATACCATGCAAACATATATTGTACATTATGATTGAAAAGCTGAAACTGAATCATATTCCAGAGCAGTACATTTTGGGGAGATGGACGCTTAGTTCAGGTATTCGACTCAATGATGAAATGAACATCAATGCTGTAGATCATCGAAAAATCACACCTTTTGAGTCTTCATTGTTTCAAGCAAAACTGAACATGGTATTTGAGAAGGCAACAGAAGATCGAGAATATTACAAGCTTGCTCATGCATTAGTTGATGAATTCTGGAAGCGGGTTGAGTTGGTTAATCAGATACATAAGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020263438.1	2.4e-100	protein FAR1-RELATED SEQUENCE 5-like
Swissprot	Q9SZL8.1	6.2e-85	Protein FAR1-RELATED SEQUENCE 5
trEMBL	A0A200QG62	3.2e-94	Zinc finger protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G38180.1	32.41	4e-85	312	FRS5	FAR1-related sequence 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g151449	AT4G38180.1	611	357	14	57	644	53	630	32.41	4e-85	312
g151449	AT5G18960.1	629	364	19	89	705	211	784	31.48	2e-73	274
g151449	AT5G18960.1	137	74	3	56	191	14	131	31.39	2e-11	67.8

Ortholog group

Species	Genes
Allium cepa	g151449.t1
Allium fistulosum
Allium sativum	Asa5G05891.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03101.12	FAR1	Domain	103	192	78.7	3.8e-22
PF10551.6	MULE	Domain	302	391	76.0	2.2e-21
PF04434.14	SWIM	Domain	595	622	29.0	5.3e-07

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network