result

Gene information

Detail information of g151900


Location
GeneChrStartEndStrand
g151900CHR4252769235252774986+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020241391.11.5e-18homeobox-leucine zipper protein HOX6-like
SwissprotQ651Z5.13.2e-05Homeodomain transcription factor HOX6
trEMBLA0A199USG52.0e-09Homeobox-leucine zipper protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT2G46680.153.067e-1989.7ATHB-7;ATHB7;HB-7homeobox 7

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag100268.t1; g151900.t1
Allium fistulosumAfisC2G05471; AfisC3G07180
Allium sativumAsa6G02890.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain21824.21.9e-05
PF02183.15HALZFamily206150.61.4e-13

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0001101Presponse to acid chemical
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0009615Presponse to virus
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006950Presponse to stress
GO:0006970Presponse to osmotic stress
GO:0008150Pbiological_process
GO:0009414Presponse to water deprivation
GO:0009415Presponse to water
GO:0009605Presponse to external stimulus
GO:0009607Presponse to biotic stimulus
GO:0051707Presponse to other organism
GO:0009628Presponse to abiotic stimulus
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009737Presponse to abscisic acid
GO:0009889Pregulation of biosynthetic process
GO:0009891Ppositive regulation of biosynthetic process
GO:0009893Ppositive regulation of metabolic process
GO:0010033Presponse to organic substance
GO:0010035Presponse to inorganic substance
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010557Ppositive regulation of macromolecule biosynthetic process
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0010628Ppositive regulation of gene expression
GO:0045935Ppositive regulation of nucleobase-containing compound metabolic process
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0031323Pregulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031328Ppositive regulation of cellular biosynthetic process
GO:0033993Presponse to lipid
GO:0042221Presponse to chemical
GO:0043207Presponse to external biotic stimulus
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043565Fsequence-specific DNA binding
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0048518Ppositive regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051173Ppositive regulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051254Ppositive regulation of RNA metabolic process
GO:0051704Pmulti-organism process
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0080090Pregulation of primary metabolic process
GO:0097159Forganic cyclic compound binding
GO:0097305Presponse to alcohol
GO:1901363Fheterocyclic compound binding
GO:1901700Presponse to oxygen-containing compound
GO:1902680Ppositive regulation of RNA biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903508Ppositive regulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09338HD-ZIP; homeobox-leucine zipper proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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