Detail information of g157122


Location
GeneChrStartEndStrand
g157122Scaffold_45236:HRSCAF_428322255812256237+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrKAF7017273.12.8e-16hypothetical protein CFC21_030742
SwissprotQ9SCP1.16.1e-08Myb-related protein 27
trEMBLA0A8J5HY819.1e-17Transcription factor MYB21-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G13480.158.936e-1369.7AtMYB79;MYB79myb domain protein 79

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag157122.t1; g417000.t1; g417019.t1; g417037.t1; g417039.t1; g441901.t1
Allium fistulosumAfisC1G01835; AfisC1G01836; AfisC1G01837; AfisC1G01841; AfisC3G02729; AfisC3G07009; AfisC3G08715
Allium sativumAsa2G02216.1; Asa3G02380.1; Asa7G01669.1; Asa7G01672.1; Asa7G01673.1
Arabidopsis thalianaAT3G24310.1; AT4G13480.1
Oryza sativaLOC_Os02g40530.1; LOC_Os03g04900.1; LOC_Os04g42950.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain32631.11.7e-07

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09422MYBP; transcription factor MYB, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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