Detail information of g159609


Location
GeneChrStartEndStrand
g159609CHR2192308169192332160+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020273797.10.0e+00protein CHROMATIN REMODELING 5-like isoform X4
SwissprotF4IV99.11.9e-312Protein CHROMATIN REMODELING 5
trEMBLA0A5P1EC950.0e+00Protein CHROMATIN REMODELING 5

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G13370.163.480.01206CHR5chromatin remodeling 5

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag159609.t1; g159610.t1
Allium fistulosumAfisC2G04365
Allium sativumAsa6G01985.1; Asa6G01986.1
Arabidopsis thalianaAT2G13370.1
Oryza sativaLOC_Os07g46590.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00385.21ChromoDomain48854255.82.8e-15
PF00176.20SNF2_NFamily595867217.71.6e-64
PF00271.28Helicase_CFamily896100972.23.7e-20

Gene Ontology
AccessionOntologyName
GO:0005575Ccellular_component
GO:0005911Ccell-cell junction
GO:0009506Cplasmodesma
GO:0030054Ccell junction
GO:0055044Csymplast

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11367CHD1; chromodomain-helicase-DNA-binding protein 1EC:3.6.4.12 --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.