result

Gene information

Detail information of g162225


Location
GeneChrStartEndStrand
g162225Scaffold_45848:HRSCAF_428934509639514350+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020256858.11.4e-233calcium-dependent protein kinase 2-like
SwissprotP53683.24.4e-221Calcium-dependent protein kinase isoform 2
trEMBLA0A5P1FEF89.8e-234Calcium-dependent protein kinase 29

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT4G04720.174.470.0 811AtCPK21;CPK21calcium-dependent protein kinase 21

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag130570.t1; g162225.t1; g231872.t1; g242186.t1; g345287.t1; g358706.t1; g6696.t1
Allium fistulosumAfisC2G03992; AfisC3G00401; AfisC4G01199; AfisC4G02630; AfisC7G02744; AfisC7G03157; AfisC8G05974
Allium sativumAsa1G00063.1; Asa2G00507.1; Asa3G02641.1; Asa4G01097.1; Asa4G02052.1; Asa4G04163.1
Arabidopsis thalianaAT1G50700.1; AT1G61950.1; AT1G76040.2; AT3G20410.1; AT4G04720.1; AT4G21940.1; AT4G21940.2; AT4G23650.1; AT5G12180.1; AT5G19360.1
Oryza sativaLOC_Os01g43410.1; LOC_Os01g59360.1; LOC_Os04g47300.1; LOC_Os05g41270.1; LOC_Os05g50810.1; LOC_Os05g50810.2; LOC_Os07g33110.1; LOC_Os07g33110.2; LOC_Os07g33110.3; LOC_Os07g33110.4; LOC_Os07g33110.5; LOC_Os11g04170.1; LOC_Os12g03970.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain74332249.82.6e-74
PF13499.3EF-hand_7Domain37943947.31.9e-12
PF13499.3EF-hand_7Domain44851149.34.5e-13

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0001101Presponse to acid chemical
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0016020Cmembrane
GO:0003824Fcatalytic activity
GO:0005829Ccytosol
GO:0004672Fprotein kinase activity
GO:0004674Fprotein serine/threonine kinase activity
GO:0004683Fcalmodulin-dependent protein kinase activity
GO:0007165Psignal transduction
GO:0035556Pintracellular signal transduction
GO:0005488Fbinding
GO:0005516Fcalmodulin binding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0005911Ccell-cell junction
GO:0006464Pcellular protein modification process
GO:0006468Pprotein phosphorylation
GO:0006793Pphosphorus metabolic process
GO:0006796Pphosphate-containing compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0007154Pcell communication
GO:0008150Pbiological_process
GO:0042493Presponse to drug
GO:0009506Cplasmodesma
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009737Presponse to abscisic acid
GO:0009738Pabscisic acid-activated signaling pathway
GO:0009751Presponse to salicylic acid
GO:0009755Phormone-mediated signaling pathway
GO:0009931Fcalcium-dependent protein serine/threonine kinase activity
GO:0009987Pcellular process
GO:0010033Presponse to organic substance
GO:0010857Fcalcium-dependent protein kinase activity
GO:0014070Presponse to organic cyclic compound
GO:0016301Fkinase activity
GO:0016310Pphosphorylation
GO:0016740Ftransferase activity
GO:0016772Ftransferase activity, transferring phosphorus-containing groups
GO:0016773Fphosphotransferase activity, alcohol group as acceptor
GO:0019899Fenzyme binding
GO:0046677Presponse to antibiotic
GO:0018105Ppeptidyl-serine phosphorylation
GO:0018193Ppeptidyl-amino acid modification
GO:0018209Ppeptidyl-serine modification
GO:0019538Pprotein metabolic process
GO:0019902Fphosphatase binding
GO:0019903Fprotein phosphatase binding
GO:0023052Psignaling
GO:0070887Pcellular response to chemical stimulus
GO:0030054Ccell junction
GO:0032870Pcellular response to hormone stimulus
GO:0033993Presponse to lipid
GO:0036211Pprotein modification process
GO:0042221Presponse to chemical
GO:0043170Pmacromolecule metabolic process
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043412Pmacromolecule modification
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044267Pcellular protein metabolic process
GO:0044424Cintracellular part
GO:0044444Ccytoplasmic part
GO:0044464Ccell part
GO:0046777Pprotein autophosphorylation
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051716Pcellular response to stimulus
GO:0055044Csymplast
GO:0065007Pbiological regulation
GO:0071215Pcellular response to abscisic acid stimulus
GO:0071229Pcellular response to acid chemical
GO:0071310Pcellular response to organic substance
GO:0071396Pcellular response to lipid
GO:0071495Pcellular response to endogenous stimulus
GO:0071704Porganic substance metabolic process
GO:0071944Ccell periphery
GO:0097305Presponse to alcohol
GO:0097306Pcellular response to alcohol
GO:1901564Porganonitrogen compound metabolic process
GO:1901700Presponse to oxygen-containing compound
GO:1901701Pcellular response to oxygen-containing compound
GO:0140096

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13412CPK; calcium-dependent protein kinaseEC:2.7.11.1 Plant-pathogen interactionko04626

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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