Gene | Chr | Start | End | Strand |
---|---|---|---|---|
g162834 | Scaffold_45939:HRSCAF_429025 | 99151 | 113106 | + |
CDS |
Protein |
Gene |
Database | accession number | e-value | annotation |
---|---|---|---|
nr | XP_020253308.1 | 5.1e-105 | LOW QUALITY PROTEIN: high mobility group B protein 15-like |
Swissprot | Q9MAT6.1 | 2.0e-77 | Nucleosome/chromatin assembly factor group D 15 |
trEMBL | A0A5P1FHR7 | 6.9e-104 | High mobility group B protein 15-like |
TAIR id | % identity | e-value | bit score | gene aliases | Short description |
---|---|---|---|---|---|
AT1G04880.1 | 48.44 | 7e-85 | 311 | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain |
Species | Genes |
---|---|
Allium cepa | g162834.t1 |
Allium fistulosum | AfisC2G06835; AfisC2G06836 |
Allium sativum | Asa6G04154.1 |
Arabidopsis thaliana | AT1G04880.1; AT1G76110.1 |
Oryza sativa | LOC_Os02g27060.1; LOC_Os02g27060.2; LOC_Os09g37250.1 |
Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
---|---|---|---|---|---|---|
PF01388.18 | ARID | Domain | 64 | 147 | 69.1 | 3.5e-19 |
PF00505.16 | HMG_box | Domain | 274 | 341 | 47.9 | 1.2e-12 |
Accession | Ontology | Name |
---|---|---|
GO:0000003 | P | reproduction |
GO:0005515 | F | protein binding |
GO:0000217 | F | DNA secondary structure binding |
GO:0005575 | C | cellular_component |
GO:0000400 | F | four-way junction DNA binding |
GO:0000902 | P | cell morphogenesis |
GO:0000904 | P | cell morphogenesis involved in differentiation |
GO:0001067 | F | regulatory region nucleic acid binding |
GO:0006790 | P | sulfur compound metabolic process |
GO:0008152 | P | metabolic process |
GO:0016049 | P | cell growth |
GO:0003006 | P | developmental process involved in reproduction |
GO:0003674 | F | molecular_function |
GO:0003676 | F | nucleic acid binding |
GO:0003677 | F | DNA binding |
GO:0003700 | F | transcription factor activity, sequence-specific DNA binding |
GO:0005488 | F | binding |
GO:0005623 | C | cell |
GO:0006082 | P | organic acid metabolic process |
GO:0006355 | P | regulation of transcription, DNA-templated |
GO:0006807 | P | nitrogen compound metabolic process |
GO:0040007 | P | growth |
GO:0009653 | P | anatomical structure morphogenesis |
GO:0008134 | F | transcription factor binding |
GO:0008150 | P | biological_process |
GO:0009826 | P | unidimensional cell growth |
GO:0009846 | P | pollen germination |
GO:0009856 | P | pollination |
GO:0009860 | P | pollen tube growth |
GO:0009889 | P | regulation of biosynthetic process |
GO:0009932 | P | cell tip growth |
GO:0009987 | P | cellular process |
GO:0010468 | P | regulation of gene expression |
GO:0010556 | P | regulation of macromolecule biosynthetic process |
GO:0044212 | F | transcription regulatory region DNA binding |
GO:0016043 | P | cellular component organization |
GO:0016143 | P | S-glycoside metabolic process |
GO:0019219 | P | regulation of nucleobase-containing compound metabolic process |
GO:0019222 | P | regulation of metabolic process |
GO:0019748 | P | secondary metabolic process |
GO:0019757 | P | glycosinolate metabolic process |
GO:0019760 | P | glucosinolate metabolic process |
GO:0022414 | P | reproductive process |
GO:0030154 | P | cell differentiation |
GO:0031323 | P | regulation of cellular metabolic process |
GO:0031326 | P | regulation of cellular biosynthetic process |
GO:0032501 | P | multicellular organismal process |
GO:0032502 | P | developmental process |
GO:0032989 | P | cellular component morphogenesis |
GO:0042995 | C | cell projection |
GO:0043436 | P | oxoacid metabolic process |
GO:0043565 | F | sequence-specific DNA binding |
GO:0044237 | P | cellular metabolic process |
GO:0044281 | P | small molecule metabolic process |
GO:0044464 | C | cell part |
GO:0044706 | P | multi-multicellular organism process |
GO:0048468 | P | cell development |
GO:0048588 | P | developmental cell growth |
GO:0048589 | P | developmental growth |
GO:0048856 | P | anatomical structure development |
GO:0048868 | P | pollen tube development |
GO:0048869 | P | cellular developmental process |
GO:0050789 | P | regulation of biological process |
GO:0050794 | P | regulation of cellular process |
GO:0051171 | P | regulation of nitrogen compound metabolic process |
GO:0051252 | P | regulation of RNA metabolic process |
GO:0051704 | P | multi-organism process |
GO:0060255 | P | regulation of macromolecule metabolic process |
GO:0060560 | P | developmental growth involved in morphogenesis |
GO:0065007 | P | biological regulation |
GO:0071704 | P | organic substance metabolic process |
GO:0071840 | P | cellular component organization or biogenesis |
GO:0080090 | P | regulation of primary metabolic process |
GO:0090406 | C | pollen tube |
GO:0097159 | F | organic cyclic compound binding |
GO:1901135 | P | carbohydrate derivative metabolic process |
GO:1901363 | F | heterocyclic compound binding |
GO:1901564 | P | organonitrogen compound metabolic process |
GO:1901657 | P | glycosyl compound metabolic process |
GO:1903506 | P | regulation of nucleic acid-templated transcription |
GO:2000112 | P | regulation of cellular macromolecule biosynthetic process |
GO:2001141 | P | regulation of RNA biosynthetic process |
GO:0120025 | ||
GO:0140110 |
KO | Name | Enzyme ID | Pathway | Pathway ID |
---|---|---|---|---|
- | - | - | - | - |