Detail information of g16323


Location
GeneChrStartEndStrand
g16323Scaffold_10723:HRSCAF_12501523383048+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPKU72660.11.5e-43hypothetical protein MA16_Dca010230
SwissprotQ9LJG8.11.6e-21Trihelix DNA-binding protein ASIL2
trEMBLA0A8J5HWQ31.7e-44Myb_DNA-bind_4 domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G05550.142.371e-38 156sequence-specific DNA binding transcription factors

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag139976.t1; g16323.t1; g245324.t1; g262048.t1; g343557.t1; g539167.t1
Allium fistulosumAfisC1G01356; AfisC1G04834; AfisC5G06923; AfisC6G00025; AfisC6G05057; AfisC7G02308
Allium sativumAsa0G04168.1; Asa3G00647.1; Asa3G03017.1; Asa3G03018.1; Asa6G07093.1; Asa7G01319.1; Asa7G02835.1; Asa8G05987.1
Arabidopsis thalianaAT3G11100.1; AT3G58630.1; AT5G05550.1; AT5G05550.2
Oryza sativaLOC_Os01g48320.1; LOC_Os05g48690.1; LOC_Os05g48690.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13837.3Myb_DNA-bind_4Domain129875.14e-21

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.