result

Gene information

Detail information of g163548

Location

Gene	Chr	Start	End	Strand
g163548	Scaffold_46009:HRSCAF_429095	289233	299635	-

Sequences

CDS

>g163548.t1
ATGCTAATTAATTATCATTTTGCAGAAGCTTCACATGCTCATTCTTGTAAGCAAAAGTATACAGAATCCACTATGGCAAATAAAGACAAGGGTACAAGCTTTCTAACTCGTAATGAAAGGCACCAGACTCATGAGCCTGAAAATGTCGATAATGATTCTAAGAAATTTGGTGAAAATGATGACCCACAAGGTGTCAATATGAACTATCAAGAAATGAGCACTTTAGGTCAAGTAGTTGGAAACGAGGGTCATGATTACATACCTGAAAATACAGAAAATGGATGCAAGAGATCTGGTGAAAATGGTAACCCAGAACACAAAGATGTGAATTGTCAAGAAATGAACACTTTAGGTCAAGTAGCAGGAAATATTAAGGATGAATTCATACTTGAAAATATGGAAATAAGATGCAGAGAAACTGCTGTAAGTGTTGAATTTGAAGATGTAATCATAAATGTAGATGTAAATTGTGAAGACATAGGCTTTTTAACACCAGGCAGTGGAGATCAGACTAATGAAAGTGAAGATTCAAAGCTTGAAAATATGGATATTGGAGAAAAAACTGATGCTTCTGATAAAAATGAAAATCTTAATTTGAGCGAAAAGGAAGATGTGAATATTGAGGTAGCCAAGAGTGGTAGAACTTCTATACGCAAGAGAAAAATGGTTGCACACAAGAAAAGCAAAAAATACCCCTTAAGGTCTTCATTAGGAAGTAACAGAGTACTTCGATCTAGGTCAACTACAAGTAAGACACAACCTGAACCGGTTAGTACCCCTGTTAATCCAGTAACTAAAACAAAGAAAAGAAAACGAATAGTAAAGCAGACTACAAATGATGAATTTTTATTGATGAGGAAGCGTGTAAGGTACTTGCTGGCTCGAATGAGTTATGAGCAGATTCTTATTGATTCTTATTCTAGTGAGGGTTGGAAAGGTCAAAGCGCAGAAAAACTCAGACCTGAAAAAGAGATAGAACGGGCCAAGTCTGAAATTTTACGTTGTAAATGTAAAATACGAGAAATTTTTCAGCGCATGGATTCTTTATCTTCTGAAGGAAGATTTGATGCATCTTTATTTGATTCTGAGGGAGAAATTGACCATGAAGATATATTTTGTTCCAAATGCGGTTCAAAGGAATCTTCCCTTGACAATGATATCCTACTTTGTGATGGCATTTGTGACCGAGGTTTTCATCAGATGTGTTTGAATCCTCCCTTACTGACAGCAGACATTCCACAAGGAGATGAAGGGTGGTTGTGCCCTCTGTGTGACTGTAAGGTAGATTGCATTGATATAGTGAATGACACTCAGGGAAGCGACATAACTATCGAGGACACATGGGAGAAAGTTTTTCCCGAGGCTGTTGCTGTTGCCAGTGGAGATAAGCAGTTTGATGATTTGCCATCAGATGATTCCGAGGATAATGATTATAATCCTGATGGATTAGCTGATGATGATGTAAAGAATCAAACTGCCAGTGGAGATAAGCAGTTTGATGGTTTGCCATCAGATGATTCCGAGGATAATGATTACGATCCTGATGGTTTAGCCGATGATGATGATGATGATGTAAAGAATGAAAATGATGAATCAGAACATGAAGATCCAGATTCTTCTCTTATAAACAAAAAAAGGGAAAATTTTGGATATCCTTCTGATGATTCGGAAGATGACGAATTTGACCCAGATGCCGTTAACCTTGATAGCAGTAAAATGGGCAGTTCAAGCTCCGATGAGTCAGACTTTACTTCTGATTCGGATGAGTTTTCTGTTGAACTTAGCAAAACTGCAGGTGCTAATAAAGGAAAAGAAAACAAGTCTCAACGTGGTTCTGCTTTAGACTCAGAGTTGAAGTTAGATAATGTGTTAGAGTCTGGAAGAAGGCAAGTTGAAAGATTAGATTACAAAACACTTTATGATGAAGCGTACAAAAATGCTTCCTCAGGCTCAAGTGATGATGAAGATTGGGGAGCATCAAATAAGAAGAAAAAAACCAACAAAAAGGAATCTAAAGAACAATCGAAGCCGGATTCACAGATCATCAATAAGCGCAAAAAATCTAAAGCTGTTGAAGGGACTGATGCATCTCAAGAGCCTGATTCTAGCGGGAAAAAATCTTCTGCATCTGGACGTGGAAAACTCAGTGAAGAAGTTAGAAAGAAACTGTACGAAAGCTTTCAAGAAAATCAATATCCTAAACGAGAGGTCAAAGAAAATTTGGCACAAGAACTTGGTATCACATATCGACAGGTGGAAAAGTGGTTTGGAAATTGTCGTCACAGCGCCAGGCATTTTGGTGAAAAAGCAACTCCAACTAAAACTCCTCCATCTAATCAAGATACAGACACTAGCAAAAAGAAAACCACTAAAGAAAGTAAAGGAAAAGCAGAAGAAAATGAGATTCAAAAAGAAGTTATTCAAGGATCAGTTCGCAACGGTAGCAAAAAGAACAGGAAACACAAGGAAACAGAACCTGAAAACAAGGATGTAGGCATGGACCGGGATAAAGCCATAGCCCGTGAATTGAAGAGAATGAACAAAGGGAAGAAAAATGTCAATGAACTTGTATCATTAGCCCTTCCAAAATTTTATTTACACCTACTATGTCATGAAAATTTCATGTTAGTGTTTTGTAATGCTCCGTACAATGTGTAA

Protein

Gene

>g163548.t1
ATGCTAATTAATTATCATTTTGCAGAAGCTTCACATGCTCATTCTTGTAGTTTTAGGATTAAAATTTTGCACTAACTACTAAGTTTCTGTGATTTTTATTTTGGATCTTAAACCTTCGGATAGAGCAAAAGTATACAGAATCCACTATGGCAAATAAAGACAAGGGTACAAGCTTTCTAACTCGTAATGAAAGGCACCAGACTCATGAGCCTGAAAATGTCGATAATGATTCTAAGAAATTTGGTGAAAATGATGACCCACAAGGTGTCAATATGAACTATCAAGAAATGAGCACTTTAGGTCAAGTAGTTGGAAACGAGGGTCATGATTACATACCTGAAAATACAGAAAATGGATGCAAGAGATCTGGTGAAAATGGTAACCCAGAACACAAAGATGTGAATTGTCAAGAAATGAACACTTTAGGTCAAGTAGCAGGAAATATTAAGGATGAATTCATACTTGAAAATATGGAAATAAGATGCAGAGAAACTGCTGTAAGTGTTGAATTTGAAGATGTAATCATAAATGTAGATGTAAATTGTGAAGACATAGGCTTTTTAACACCAGGCAGTGGAGATCAGACTAATGAAAGTGAAGATTCAAAGCTTGAAAATATGGATATTGGAGAAAAAACTGATGCTTCTGATAAAAATGAAAATCTTAATTTGAGCGAAAAGGAAGATGTGAATATTGAGGTAGCCAAGAGTGGTAGAACTTCTATACGCAAGAGAAAAATGGTTGCACACAAGAAAAGCAAAAAATACCCCTTAAGGTCTTCATTAGGAAGTAACAGAGTACTTCGATCTAGGTCAACTACAAGTAAGACACAACCTGAACCGGTTAGTACCCCTGTTAATCCAGTAACTAAAACAAAGAAAAGAAAACGAATAGTAAAGCAGACTACAAATGATGAATTTTTATTGATGAGGAAGCGTGTAAGGTACTTGCTGGCTCGAATGAGTTATGAGCAGATTCTTATTGATTCTTATTCTAGTGAGGGTTGGAAAGGTCAAAGGTACGTGTTCGAAAACATTGATGCATCATTTCTTGGTTTCGTATTGTCTCCTAACTAATTATTCCAGAGTAAGGTTTAATGAATATGTTTGCCATGTTAGTAATTTCTTATGAATATCTTCTTTTGCATATTATATTATTTTTCAAAGCAAACCTTTTGAGAATATGCTTGCATCTTCCTATGAAACCTTATCAGAATTTTCTTTTTAATTACAAAATGTTAACAAAATATTTGTACATTGAAATTTAATACCATCTCATGAAATATTTCTAAATTGCTTGGACATTACTTTTTATATTTATTCATGAATGTTACTATAGTAGCAAGATATTATTTGTGTATGTATGTGTTTGTCTACACACACATGTTCCAATTTGCTTTTACACAAAACGTTGTAGTAAAAATTAATCCAATCGACCAATCTCAGTGCTGTAAAAAGTGCATCTTGACTCATGGTTGCCTTCTTATTTTGGTCTATTCACTTTTGTTTATTTGCTCATTTCTAGGGTCCAGAAGGCATAAAAATTTGTATTTACAGTAAAATCGTGTTTTTTTATTGGTTTTCATTCCTTTTTTGTTTCTAATGGAGAACAATCTTCCGTTGAATTTTTTGGCTTTTAATTGGTTTTTTGACTTTAGAATGAAAATTCAGTGCTTATAGCATTGTATTTGATGATATTTTTGTGAAATAATATATAAAACTTGTTAACTATCTTCTTTAGAAGAAATACCTTGACATTAGTTTTGCTGACTGGTGTGTGATATTAGACAAGAAAGATAATTGCTTAATTCTTGTTAAATAAGTCGTTGTATTCTGACGCGCTTCGAATACTGCTTTGTGCTTCAAATCTCTACAAAGTCTTTGTGCTTTGTGCATCATAAATAACTATGACCAATTTATTGGAGGGTTTCATTCTCATCTTATGACCAATTTATCGGAGGTTCTTGTCATGGGAAGATAAAAATAAGCGTGTAAATAGTTTATGTAAATAACATTGATCAACTATGTGTGTGTTGCTCCTTTTTAGTTAAGCATGCGGTTTATGTAAAAAAAATGTTGGAAAACTAAATAGTCCTGACTAGTCCTAAGCTTTACAATGATGACTGGTTTTTTTCTTCTGAATACATCATAATCATGATATGATTGGAATTCTGGTCAACTGACTCAGTTCTCACTGTATTGCTATTAGTTTAGTTGGGGTTATTTATTGGGTTGAGCATCAATGAAAGGGTAATTTAATCTTCTTTCATGGGTTCTGAAAACAGTGTTCAAATTTAGAAGATATACTACATACGAATCTGATTATATGGAAATCTGGGGCAATAATGCTGTTGACCCCATCTGTAAGATTTATCCTTCGGAGAGCCTTAAATTGTTGCAGAAAACATTCAGCACGTACAGTTATTTTCTTTCATTAATATATTTTTCCCATCTTTCAGCGCAGAAAAACTCAGACCTGAAAAAGAGATAGAACGGGCCAAGTCTGAAATTTTACGTTGTAAATGTAAAATACGAGAAATTTTTCAGCGCATGGATTCTTTATCTTCTGAAGGAAGATTTGATGCATCTTTATTTGATTCTGAGGGAGAAATTGACCATGAAGATGTAAGTGAATTCCAGTAAGATGTCCGAATAAAGAGATTTAACCCTGTATTGCAGTTATAACCTAACAGTCATGCCATTTATACCAACTAAAAGTTTCTCAGAAAGCGAAAATAAAGGAATATTTTCTATGTAGCCATTTTCTTTTTCATATATCATACAAGTATTTTTTTTACAATATACCTCAAATCTAGTTCTTTTGCAATGCATGATATTGATACAAATATAAATGCTACTGAATAACTGTTCACAACTTGATCTGTAATTTTGCCAGATATTTTGTTCCAAATGCGGTTCAAAGGAATCTTCCCTTGACAATGATATCCTACTTTGTGATGGCATTTGTGACCGAGGTTTTCATCAGATGTGTTTGAATCCTCCCTTACTGACAGCAGACAGTAATATCCATCTCCAAATTGTTTGTTTTTTAACTTCCCAGGTAAAAATGAACACCAATGGTATTTGAAATCATTATTTTTGTTTTCTTTCAGTTCCACAAGGAGATGAAGGGTGGTTGTGCCCTCTGTGTGACTGTAAGGTAGATTGCATTGATATAGTGAATGACACTCAGGGAAGCGACATAACTATCGAGGACACATGGGAGGTAATGAAAAAATGGAGAATAGAACATGCTTCTTTTGGAATGGTTTGATTCCCCCAAATCAATAACCAACATTTGGCCAAATAACCAATATCCACCTTTTGTACTATTAAAAGATGTTAAGGAATCAAGTTTTCACAATGAGATTCAAATTGTAAAATATAAACTTTAAATCGAAATAGGATTCAAATCGCGACTTCTAGAGTTAGAAAGTTCATGTTCCATTGATTTTGTAAGTTTTTATGCTATATATATCATTGTTTTGAAAGGCGAAAGCGTACGCTAGTCGTGTTCGGGTCCGTGAGGCGAGGCATAAGCCTCGAAACGTTGAGCCGTAAGCTCTTCGGGTATAAAAACGCAAAATATATAGTGAAATTTGACATAAAATATTAAATATTAAATAAGAAACATAAAGCAGTCCTAAAGCATTCTGAAGCAATTCGAACAAAATACAAATATCTTTTATATTAATCTCAGTTGACCTTATGTACAAGAAAGTAAAAAAAACCGATCATTTAAGCATGCAGTATTTTTGTAAAAAATAACAAAAAATAAATAAAAATTGCTTAATCGATTCTAGTAAGTGGAATCGAAGCCGATTCCAGTTACTGGAATCGAGCTCAATTCCATAATCGAGTTCCAACTCGATTATGGATTTGACTTCGATTCCAATACTGGAATTGAAGTTAGCTCGAGTGGGAAAAAAAAACCTATTTAGCTCTCTGTTGACTAAGAGATGGAATGAGCAACAAAACACAGAGAACTAGGGTTTTTGAATAAACAGGTCAAAAAAAATCACCTTAAAGGCTTAAGCCTCACTACGTTTTTCATCTGAGGCATGTGTTTTTTGCGAGCGTGCGTAAGCCTCTTAGGTAAAACGCCTTTTGACTTGCGCCTCGGCTCGTTTTCACTTTCGCCTCTCTCGTATTTTTAACACGTTGATACATACATGTATGTGTGTATAGAGCAAGTATCGACTACACCTCAATTTGGCTACACCTTATTGCCCTCTTGATTTCCAACACAAGTTCTGATTTAAATAATAATATTTTCTATAGTTTAGTGGGAAGAGAGAGAAAGTATTATTATTTAAATCGGACTTGTGGTGGAAATCAAGGGGGATTAGAAGTGTAGTCAAATTGAGGTGTAGTCGATCTCCTACCCATACGCAAATCCTTACCCATACGCACACACATATACATTTACACACAAACACACACATATAGTATGCATGTCTGTGTATTATATATAGGTTATCAAATCACATTACACGTTCAATTCTGCAAAAAAATTATTCTTTTTTCCAGTGTAATTAACTAATTTCTTTGACATAGATTTTGATGTTGAGTATGACCTTCTTCATCCAAATCTAAAAGATATATTGTCTCCGTTGTTTATCTTTATTAAAAAAAAGACCAAGTAATGTAACTAATGTTATATAAGAAAACTTGTTCGAGATAACTTTTTAAATGAATGTGAAAATTGTATGCAAAAAGGATTAGTGAATTTTCGGTAAAAGGAATTACACCAAATGTCGATTCTAAGCCCTCACCTGTTTGCATATGGCTTTGATGAAATAATAAGTAAACTTCAAGGGAATATCACAATGCATGATGGCTGCTGATGATGTTTTGTTGATAGACATCTCACAAAAAAAACCTAGAATTAGAATTGAATAAATATAGAAATGCACTAGTCACAAAAGGGTTGAAACTAAGTAGGACCTAATCTGAGTATATGAAATGCAATTTTAACAAAGAATAAAGTAAACTACAAAACAAATGATTAGTTAGAAGCTGTGCAGTTAAAGCTCCGCTAAAGCCCTCGAAATTCCCGCTTTAGCGCATAGCGTTTTTCGACCGCTACGTTTATGCTATTTCAGCTTTAGTGCATAGCGTTTTTCGACTGCTACACTTTCAGTTTAGCGCTATTGAACGTTAGATCTGTTTTAAGTTTCGTTATTTTCCGCTACAACCGCTAGATCAAGGCTTTTTAGCATCCGCATTAGCAATATTAATATACAAAGGTTGATTTAATTAGTTCTTTTTTAAACTAAATCAATAAAGCTAGGGCAAAAACCCAATTTCAACGTATAAGTGTTCAATATAAGTTAGAAATCTATTATAGTCACCAAATCTAGTCTATATAAATTACGATATTTTTTGGTTTTGTTATATAAGGTTAAACAATATTTCTTTTTCCTACAAAAATGATTTGATAATGAGAATAAATTAACTTTAATTATTTGGTTCTATATCTAATGAAGCTTTTTACAGATCCGTTTTTGCTATATCCCCTCTATAACTTTTTGTATCTCCACTGCTATAAAACCGCCAGGCGCTTTAACTGCACAGAATTTTAGAAATTATGTTCAGATATCAAGGATCAACAATTCAAAAGGATGTATGTATAGAAAAGACATAATGAACTAAATCAAAGCATGTACCGGACTACATTGTTTGCAGTGGAGTACTGGACTTAATAAAAAGAAACATGGAAATAGATGAATGCAGGAAAAATAAAAATGCTAAGGTGGGTGATTGAAGCATTGAAAAAGATAGATTTACAAGTAAAAGGGTAAGAAAAAAGACTGAAAGTGACACTTGCAAACTAGGGAAAAAAATAGAAGTGACATTTTTGGTACTAACACGTACGCGGTACGACATAGACAAAGCAACACACCATGGAAGAAAATATTTACATTGAATAGGAATGACAAAAGGCCGACTTAAATTAATATGTCATAAAATTGAAATATGTGGAGGAAGATAATTAATGCGACTAACCCCCAATCGCTTGGTACTAAGGCCAAGAAAGAAGAAGAAGATGATGTTGTTCTATCCTTATTTTGTTTGGAAAAGATTAAATTTGGAAGAGTCCGAATAAATATTTTGATATTATTTAGTGTAGCTTTGATTTAATTATTTTTCTCAACTTTCATTGAGTTTTGAATTTGAATTTGAAAATTTGATCGTAATAGGAGAGATTCAATTTGAAATGAGATTTAAATCGTTAGATTATTAATATTTTTGATAACAATGGCAAGGACCAATGCCCAAGCGTCACGTGACCATCTTAATATCAGAAACGTATTTTAATGTAGAAGTAAATTATGACTTGGTTTTAGGTTTCATTATGTTTCGGTAAGACCGAGGTTTTAGAGTCAGTAGTATTTGTACAAATCCAAAATTTTGGACTTGAACTGTATAATTTTGGCAGAAAGTTTTTCCCGAGGCTGTTGCTGTTGCCAGTGGAGATAAGCAGTTTGATGATTTGCCATCAGATGATTCCGAGGATAATGATTATAATCCTGATGGATTAGCTGATGATGATGTAAAGAATCAAACTGCCAGTGGAGATAAGCAGTTTGATGGTTTGCCATCAGATGATTCCGAGGATAATGATTACGATCCTGATGGTTTAGCCGATGATGATGATGATGATGTAAAGAATGAAAATGATGAATCAGAACATGAAGATCCAGATTCTTCTCTTATAAACAAAAAAAGGGAAAATTTTGGATATCCTTCTGATGATTCGGAAGATGACGAATTTGACCCAGATGCCGTTAACCTTGATAGCAGTAAAATGGGCAGTTCAAGCTCCGATGAGTCAGACTTTACTTCTGATTCGGATGAGTTTTCTGTTGAACTTAGCAAAACTGCAGGTGCTAATAAAGGAAAAGAAAACAAGTCTCAACGTGGTTCTGCTTTAGACTCAGAGTTGAAGTTAGATAATGTGTTAGAGTCTGGAAGAAGGCAAGTTGAAAGATTAGATTACAAAACACTTTATGATGTAAGTTCCCTTAGCTTGATCATGTCTATTATATATACATTTAGCATACAGCTGAATACCGATTGAATCATTTCTTGTGGTTGACCCGGTAGGCTTCATTAATTGAAGCTAGCAAACTTCTCAGAAACTGAAGTTACCGGCTAGTTATATATTTTTGTTGCACTTTGTGGTGTTAGAAACTAAGACACTGAACATGGGATGCTTCTCTGTATCATTCTTCTAATTGCACTTTGTAGTGTTAGAAACTGAAAATTTACATCACATTGATCAAATGTACTTTGATTACAAAGCTACTCACAAATCTTTTTGTATGAATAATCTGCAAGTTTTTGGCAATTCTGAAACAAGAATGAGATGTTCTGTTTTATTATTGAAATCACCTTGGTTGTAGACTATACTAAACTTAATAAAGGTGTTGATGTTAGAACTTAACTTGCAATGCTGTTTCTAAAAATTTAACGCATTACAGTTGCGTCCTGCTACACGCAGATTTAAGATGTAAAGTACAAAATAATCTACTCTCAATCTTGGATTACCTTGTTGATTCTCAGAGCATTCTCGTTAATTTTTACTAACATCATAAAGATACGTTGGTTCTGCCTGTGTTCATAATGCCAACTACATGTATAGCCCGTTACCATACAATATGTTTTACAAATCATTTGTTTAAGACACTAAATTCTGGAGTGACGTCATAGTTTTGGTTATATATATATATATATATATAATATATATATATTACAAATGAAGCCGTCTAGTGGACTTCTTTCTCATTGAAAGAAATTGATTTGCCACACAAACCCATTTTATGCATCCCTAGGATCATTCTCTTATTTATATATTGCCATCTTCCTGTGTTTTCTAGGAAGCGTACAAAAATGCTTCCTCAGGCTCAAGTGATGATGAAGATTGGGGAGCATCAAATAAGAAGAAAAAAACCAACAAAAAGGAATCTAAAGAACAATCGAAGCCGGATTCACAGATCATCAATAAGCGCAAAAAATCTAAAGCTGTTGAAGGGACTGATGCATCTCAAGAGCCTGATTCTAGCGGGAAAAAATCTTCTGCATCTGGACGTGGAAAACTCAGTGAAGAAGTTAGAAAGGTACGAGTGATGTTATTTTATGTGTATGTGTGTCTGTGCACGCGTGCAGACACGTGCATGTATGCGTTTGTGTATTTCTTAATATTTTCTCTTTCAAAACACCAATTACTTGGTCAAAGATCACAAGTTCAACCGGTTAGTGGTATGACGCTCTTGACTCAGGTTCTAGAAGTCATGAGTTTGAACCACTAAGACATCAAGATGAGTTTTGCTTGATTGAAGTCATCTGATAAGCATGATTGGTTAGTAAGTGTGCCTTCTTTGCAAAATGTGACGTGTCTAGTACCACGCTTACTATATAAAAAAATACCAATTATTTGAAGTCGTCTATAAGCATGATTGGTTAGTACGTGTGCCTCTATGCAGTTAAAGCCCCGCTAAAGTCCTGCAAAATCGCCGCCATAGCCAGTAGCGCTCTTCGAATGCTACGTTATTTCAATTTAGCATCATTAAACAGTAGATTCGCTTTAAGCCTCGCTATTTTCCGCTACGACCACTAAATTAAGGTTTTTTTAGTATCCGCTTTAACAACTTTAATATACAAAGATTGATTTGACTAGTTTTCATTTAAATCAAATCAACAAAGTTAGGATTAAGATAAATTTTAAGGGATAATTGTTCAATACAAGTTAGAAGTTTACCATAATCACAAAATCTAGTCTGCATAAATCATGATATTATTTGTTTTTGTTATATAAGACTAAACAATATTTCTTTTCCCTACACAAATGATGTTAGAATGAGAATAAACTAACTTTAAATATTTGGTTTATATCCGATGAAGCGTTTTGCACCTTCGCTATTTTCCGCTATCTCCGCTTTATTCCCGTTATAAATTTTTGCACCTCCACTTCTATAAAACCGCTAAGCGCTTTAACTGCATATGCATGCCTTTTTGCAAGATGTGATGTGTCTATTACATCTATTTTTGTTGAAGTTTTTGTAATTTACTATATCTTCGAATTTATCTGCGCATGCATGATTGTGAATTATAAACATACATTGGACCCTTTGTTCTTATGAAAAGAGAGTGTTTCTAAAACTATATGATTCTGATACCGATGAAAAGAAGTCCTGCATCAAGAATTAACTAAAACAAGATCATGTATGAATATAAAGAGACTACTATTTGCATAGACCAGTTGGTTTTGTGAGTACACTATGCAGTTCTTTATAAGAAAAAAATAGAACCTGGGGTTATAGATGTCGTGAGTTGAAGCTGACGGGCACAACTTAATTCTCTTCAGGAGTTTACTGATCCCACCGGGTTCCCCTGAGTATATTAAAAAAAAAGGGCTAACATAAGCTAGCTTATTAAACAAGCCTAGTTTTAGGCCTGTATAACCCGGCACATATAGTTAGGCACCCAGATACGGCTACACATATGTAGCTACGCCTATATTTCTTTGTTTTATTTATCAGCGAGTCGTTGATTGCAAGCAAACAACCTCTCTTAAATCCCCTGTGACCTGTTTTAGGCTTCCATTTGTTCTTCTACCACTTCTTATATGCTCATATACATAGACTTGGTTGTATTTTTTTTCTCCATAGACAGTACTATTGTTAGTTTCTTTTAAATTCCATATTTTCTCCATGGTAACCATTATAATGTATTGAGTGTAGAAACTGTACGAAAGCTTTCAAGAAAATCAATATCCTAAACGAGAGGTCAAAGAAAATTTGGCACAAGAACTTGGTATCACATATCGACAGGTCTTTGAAACTTTTTTTATTTTTGTTTTTAGAGGACATATAAAACACTAAAACTAACTAATTACCTTTTTGTTTATAACCGAAGGTGGAAAAGTGGTTTGGAAATTGTCGTCACAGCGCCAGGCATTTTGGTGAAAAAGCAACTCCAACTAAAACTCCTCCATCTAATCAAGATACAGACACTAGCAAAAAGAAAACCACTAAAGAAAGTAAAGGAAAAGCAGAAGAAAATGAGATTCAAAAAGAAGTTATTCAAGGATCAGTTCGCAACGGTAGCAAAAAGAACAGGAAACACAAGGAAACAGAACCTGAAAACAAGGATGTAGGCATGGACCGGGATAAAGCCATAGCCCGTGAATTGAAGAGAATGAACAAAGGGAAGAAAGTTCGATAACTTTTTTTTGAAGCATTTAGTGTGATCATTTTCACTTTGTGATCTGCAGCAGAATATTATTTGGTTCAGAATGTCAATGAACTTGTATCATTAGCCCTTCCAAAATTTTATTTACACCTACTATGTCATGAAAATTTCATGTTAGTGTTTTGTAATGCTCCGTACAATGTGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020257693.1	4.4e-107	homeobox protein HOX1A-like
Swissprot	P46605.1	5.7e-96	Homeobox protein HOX1A
trEMBL	A0A5P1FBW1	3.1e-107	Homeobox protein HOX1A

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G19510.1	39.39	3e-87	320	HAT3.1	Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g163548	AT3G19510.1	627	288	18	246	820	136	722	39.39	3e-87	320
g163548	AT4G29940.1	182	94	0	280	461	100	281	48.35	2e-55	214
g163548	AT4G29940.2	182	94	0	280	461	100	281	48.35	2e-55	214

Ortholog group

Species	Genes
Allium cepa	g163548.t1
Allium fistulosum	AfisC5G06592
Allium sativum	Asa4G04920.1
Arabidopsis thaliana	AT3G19510.1
Oryza sativa	LOC_Os06g12400.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00628.26	PHD	Domain	372	427	42.0	5.7e-11
PF00046.26	Homeobox	Domain	712	764	45.6	4e-12

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0003674	F	molecular_function
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005488	F	binding
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008150	P	biological_process
GO:0009889	P	regulation of biosynthetic process
GO:0009890	P	negative regulation of biosynthetic process
GO:0009891	P	positive regulation of biosynthetic process
GO:0009892	P	negative regulation of metabolic process
GO:0009893	P	positive regulation of metabolic process
GO:0009937	P	regulation of gibberellic acid mediated signaling pathway
GO:0009939	P	positive regulation of gibberellic acid mediated signaling pathway
GO:0009966	P	regulation of signal transduction
GO:0009967	P	positive regulation of signal transduction
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0010557	P	positive regulation of macromolecule biosynthetic process
GO:0010558	P	negative regulation of macromolecule biosynthetic process
GO:0010604	P	positive regulation of macromolecule metabolic process
GO:0010605	P	negative regulation of macromolecule metabolic process
GO:0010628	P	positive regulation of gene expression
GO:0010646	P	regulation of cell communication
GO:0010647	P	positive regulation of cell communication
GO:0045935	P	positive regulation of nucleobase-containing compound metabolic process
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0023051	P	regulation of signaling
GO:0023056	P	positive regulation of signaling
GO:0031323	P	regulation of cellular metabolic process
GO:0031324	P	negative regulation of cellular metabolic process
GO:0031325	P	positive regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0031327	P	negative regulation of cellular biosynthetic process
GO:0031328	P	positive regulation of cellular biosynthetic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043565	F	sequence-specific DNA binding
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0045934	P	negative regulation of nucleobase-containing compound metabolic process
GO:0048518	P	positive regulation of biological process
GO:0048519	P	negative regulation of biological process
GO:0048522	P	positive regulation of cellular process
GO:0048523	P	negative regulation of cellular process
GO:0048583	P	regulation of response to stimulus
GO:0048584	P	positive regulation of response to stimulus
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051172	P	negative regulation of nitrogen compound metabolic process
GO:0051173	P	positive regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0051253	P	negative regulation of RNA metabolic process
GO:0051254	P	positive regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:0097159	F	organic cyclic compound binding
GO:1901363	F	heterocyclic compound binding
GO:1902679	P	negative regulation of RNA biosynthetic process
GO:1902680	P	positive regulation of RNA biosynthetic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:1903507	P	negative regulation of nucleic acid-templated transcription
GO:1903508	P	positive regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K11657	RSF1; remodeling and spacing factor 1	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network